//------------------------------------------------------------------------------
// Copyright (c) 2005, 2006 IBM Corporation and others.
// All rights reserved. This program and the accompanying materials
// are made available under the terms of the Eclipse Public License v1.0
// which accompanies this distribution, and is available at
// http://www.eclipse.org/legal/epl-v10.html
//
// Contributors:
// IBM Corporation - initial implementation
//------------------------------------------------------------------------------
package org.eclipse.epf.library.layout.elements;

import java.io.File;
import java.io.IOException;
import java.net.URI;
import java.net.URL;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.Comparator;
import java.util.HashMap;
import java.util.HashSet;
import java.util.Iterator;
import java.util.List;
import java.util.Map;
import java.util.Set;

import org.eclipse.emf.ecore.EAttribute;
import org.eclipse.emf.ecore.EClass;
import org.eclipse.emf.ecore.EClassifier;
import org.eclipse.emf.ecore.EStructuralFeature;
import org.eclipse.emf.ecore.resource.Resource;
import org.eclipse.emf.ecore.resource.ResourceSet;
import org.eclipse.epf.common.serviceability.Logger;
import org.eclipse.epf.common.utils.FileUtil;
import org.eclipse.epf.common.utils.NetUtil;
import org.eclipse.epf.common.utils.StrUtil;
import org.eclipse.epf.library.ILibraryResourceManager;
import org.eclipse.epf.library.LibraryPlugin;
import org.eclipse.epf.library.LibraryService;
import org.eclipse.epf.library.configuration.ConfigurationHelper;
import org.eclipse.epf.library.configuration.ElementRealizer;
import org.eclipse.epf.library.edit.PresentationContext;
import org.eclipse.epf.library.edit.meta.IMetaDef;
import org.eclipse.epf.library.edit.meta.ReferenceTable;
import org.eclipse.epf.library.edit.meta.TypeDefUtil;
import org.eclipse.epf.library.edit.util.CategorySortHelper;
import org.eclipse.epf.library.edit.util.MethodElementPropUtil;
import org.eclipse.epf.library.edit.util.PracticePropUtil;
import org.eclipse.epf.library.edit.util.ProcessUtil;
import org.eclipse.epf.library.edit.util.PropUtil;
import org.eclipse.epf.library.edit.util.TngUtil;
import org.eclipse.epf.library.layout.ElementLayoutManager;
import org.eclipse.epf.library.layout.ElementPropertyProviderManager;
import org.eclipse.epf.library.layout.IElementLayout;
import org.eclipse.epf.library.layout.LayoutInfo;
import org.eclipse.epf.library.layout.LayoutResources;
import org.eclipse.epf.library.layout.util.XmlElement;
import org.eclipse.epf.library.persistence.ILibraryResourceSet;
import org.eclipse.epf.library.util.LibraryUtil;
import org.eclipse.epf.library.util.ResourceHelper;
import org.eclipse.epf.persistence.MultiFileXMISaveImpl;
import org.eclipse.epf.uma.Activity;
import org.eclipse.epf.uma.BreakdownElement;
import org.eclipse.epf.uma.Checklist;
import org.eclipse.epf.uma.Concept;
import org.eclipse.epf.uma.ContentDescription;
import org.eclipse.epf.uma.ContentElement;
import org.eclipse.epf.uma.CustomCategory;
import org.eclipse.epf.uma.DescribableElement;
import org.eclipse.epf.uma.Descriptor;
import org.eclipse.epf.uma.Example;
import org.eclipse.epf.uma.Guideline;
import org.eclipse.epf.uma.MethodConfiguration;
import org.eclipse.epf.uma.MethodElement;
import org.eclipse.epf.uma.MethodElementProperty;
import org.eclipse.epf.uma.MethodLibrary;
import org.eclipse.epf.uma.MethodPlugin;
import org.eclipse.epf.uma.Practice;
import org.eclipse.epf.uma.ReusableAsset;
import org.eclipse.epf.uma.Roadmap;
import org.eclipse.epf.uma.Role;
import org.eclipse.epf.uma.SupportingMaterial;
import org.eclipse.epf.uma.Task;
import org.eclipse.epf.uma.UmaPackage;
import org.eclipse.epf.uma.VariabilityElement;
import org.eclipse.epf.uma.VariabilityType;
import org.eclipse.epf.uma.Whitepaper;
import org.eclipse.epf.uma.WorkOrder;
import org.eclipse.epf.uma.WorkProduct;
import org.eclipse.epf.uma.WorkProductDescriptor;
import org.eclipse.epf.uma.ecore.util.OppositeFeature;
import org.eclipse.epf.uma.util.AssociationHelper;
import org.eclipse.epf.uma.util.ExtendedAttribute;
import org.eclipse.epf.uma.util.ExtendedOpposite;
import org.eclipse.epf.uma.util.ExtendedReference;
import org.eclipse.epf.uma.util.ExtendedSection;
import org.eclipse.epf.uma.util.ExtendedTable;
import org.eclipse.epf.uma.util.MetaElement;
import org.eclipse.epf.uma.util.ModifiedTypeMeta;
import org.eclipse.epf.uma.util.QualifiedReference;
import org.eclipse.epf.uma.util.UmaUtil;
import org.eclipse.epf.uma.util.UserDefinedTypeMeta;

/**
 * The abstract layout for all Method Elements.
 * 
 * @author Jinhua Xi
 * @author Kelvin Low
 * @author Weiping Lu
 * @sicne 1.0
 */
public abstract class AbstractElementLayout implements IElementLayout {

	public static boolean processDescritorsNewOption = false;
	
	public static final String TAG_REFERENCE = "reference"; 		//$NON-NLS-1$
	public static final String TAG_REFERENCELIST = "referenceList"; //$NON-NLS-1$
	public static final String TAG_SECTION = "section";				//$NON-NLS-1$
	public static final String TAG_RTE = "rte";						//$NON-NLS-1$
	public static final String TAG_TABLE = "table";					//$NON-NLS-1$
	public static final String TAG_ColumnList = "columnList";		//$NON-NLS-1$
	public static final String TAG_RowList = "rowList";				//$NON-NLS-1$
	public static final String TAG_Column = "column";				//$NON-NLS-1$
	public static final String TAG_Row = "row";						//$NON-NLS-1$
	public static final String TAG_Cell = "Cell";					//$NON-NLS-1$
	
	//Use "new String" to make sure the following instances are not the same
	private static final String Att_ExtendeReference_1 = new String("ExtendedReference");	//$NON-NLS-1$	
	private static final String Att_ExtendeReference_2 = new String("ExtendedReference");	//$NON-NLS-1$
	private static final String Att_ReferenceType = "referenceType"; 						//$NON-NLS-1$
	
	protected ElementLayoutManager layoutManager;

	protected MethodElement element;

	protected MethodElement ownerElement;

	protected String url = null;

	// element element path relative to the publishing root
	protected String elementPath = ""; //$NON-NLS-1$

	// the back up path to reath the publishing root
	protected String backPath = ""; //$NON-NLS-1$

	// map of layout file to the output file extention, if the element has more
	// than one layout output
	protected List layouts = null;

	protected MethodElement targetElement = null;

	protected boolean showElementLink = true;
	
	protected boolean debug = LibraryPlugin.getDefault().isDebugging();

	private ElementLayoutExtender extender;
	
	private String noAdjustedElementPath;
	
	public AbstractElementLayout() {
	}

	/**
	 * if the element's content is target for another element, set it here. for
	 * example, step content cat target for a Task or a task descriptor
	 * copyright content can target to different elements.
	 * 
	 * The purpose of this is that the system will fix the links in the content
	 * to relative to the target element.
	 */
	public void setContentTarget(MethodElement targetElement) {
		this.targetElement = targetElement;
	}

	/**
	 * need to set the owner of the current layout element. In most cases this
	 * should be the eContainer of the element. This is needed because in some
	 * situation the element does not have an owner when the object is created.
	 * For example, the ContentDescription object's eContiner is null if the
	 * content file is not saved.
	 * 
	 * @param owner
	 *            MethodElement
	 */
	public void setElementOwner(MethodElement owner) {
		this.ownerElement = owner;
	}

	/**
	 * @deprecated
	 */
	public void setShowElementLink(boolean show) {
		this.showElementLink = show;
	}
	
	/**
	 * initialize the layout with the element layout manager and the element.
	 * @param layoutManager ElementLayoutManager
	 * @param element MethodElement
	 */
	public abstract void init(ElementLayoutManager layoutManager,
			MethodElement element);

	protected void __init(ElementLayoutManager layoutManager,
			MethodElement element) {
		this.layoutManager = layoutManager;
		this.element = element;
		if (!ConfigurationHelper.isDescriptionElement(element)) {
			if ( !(element instanceof MethodConfiguration) ) {
				// make sure the element is loaded with the correct container
				// otherwise the  element may not have a valid container
				// and thus the element content path can't be determined
				// this is just a workaround. should we have a better way to make sure the elements are loaded correctly???????????
				// 160441 - Missing template files when publish configuration
				MethodPlugin plugin = LibraryUtil.getMethodPlugin(element);
				if ( plugin == null || plugin.eContainer() == null) {
					
					// this should not happen in publishing mode since the whole library is already loaded
					if ( debug && getLayoutMgr().isPublishingMode() ) {
						System.out.println("Error: Element without a valid container: " + LibraryUtil.getTypeName(element)); //$NON-NLS-1$
					}
					
					LibraryUtil.getMethodPlugins(LibraryService.getInstance().getCurrentMethodLibrary());
				} 
			}
			buildPath();
			this.url = elementPath + getFileName(ResourceHelper.FILE_EXT_HTML);
		}
		
		// this is a workaround. 
		// we need to pass parameters in the file url, 
		// however, if the file does not exist, the parameters is not passed over in browsing
		// so create a dummy file
		if (!this.layoutManager.isPublishingMode() && !(
					element instanceof ContentDescription 
				|| element.eContainer() instanceof ContentDescription
				|| element instanceof MethodConfiguration) )
		{
			try {
				String html_file = this.layoutManager.getPublishDir() + this.getFilePath() + getFileName(ResourceHelper.FILE_EXT_HTML);
				File f = new File(html_file);
				if ( !f.exists() )
				{
					f.getParentFile().mkdirs();
					f.createNewFile();
				}
			} catch (IOException e) {
				e.printStackTrace();
			}
		}
		
		preloadOppositefeatures();

	}

	private void preloadOppositefeatures() {
		// make sure the processes are loaded before calculating the feature
		// otherwise the opposite feature map is not populated
		// fine for publishing since the whole library is loaded already
		// special handling for browsing
		// load the opposite feature specifically
		if ( getLayoutMgr().isPublishingMode() ) {
			return;
		}
		
		//OppositeFeature of;
		Resource res = element.eResource();
		if ( res == null ) {
			return;
		}
		
		ResourceSet resSet = res.getResourceSet();
		if ( !(resSet instanceof ILibraryResourceSet) ) {
			return;
		}
		
		List<OppositeFeature> oppositeFeatures = new ArrayList<OppositeFeature>();
		if ( this.element instanceof Role ) {
			oppositeFeatures.add(AssociationHelper.Role_RoleDescriptors);
		} else if ( this.element instanceof Task ) {
			oppositeFeatures.add(AssociationHelper.Task_TaskDescriptors);
		} else if ( this.element instanceof WorkProduct ) {
			oppositeFeatures.add(AssociationHelper.WorkProduct_WorkProductDescriptors);
		} else if ( this.element instanceof Checklist ) {
			oppositeFeatures.add(AssociationHelper.Checklist_BreakdownElements);
		} else if ( this.element instanceof Concept || this.element instanceof Whitepaper ) {
			oppositeFeatures.add(AssociationHelper.Concept_BreakdownElements);
		} else if ( this.element instanceof Checklist ) {
			oppositeFeatures.add(AssociationHelper.Checklist_BreakdownElements);
		} else if ( this.element instanceof Example ) {
			oppositeFeatures.add(AssociationHelper.Example_BreakdownElements);
		} else if ( this.element instanceof Guideline ) {
			oppositeFeatures.add(AssociationHelper.Guideline_BreakdownElements);
		} else if ( this.element instanceof ReusableAsset ) {
			oppositeFeatures.add(AssociationHelper.ReusableAsset_BreakdownElements);
		} else if ( this.element instanceof Roadmap ) {
			oppositeFeatures.add(AssociationHelper.Roadmap_Activites);
		} else if ( this.element instanceof SupportingMaterial ) {
			oppositeFeatures.add(AssociationHelper.SupportingMaterial_BreakdownElements);
		} 
	
		if ( oppositeFeatures.size() > 0 ) {
			ConfigurationHelper.getDelegate().loadOppositeFeatures(
					(ILibraryResourceSet) resSet, oppositeFeatures, element);
		}
	}

	protected void setLayoutInfo(LayoutInfo info) {
		if (layouts == null) {
			layouts = new ArrayList();
		}
		layouts.add(info);
	}

	/**
	 * return a list of LayoutInfo objects
	 * 
	 * @return a list of LayoutInfo objects
	 */
	public List getLayouts() {
		return layouts;
	}

	/**
	 * get layout by name
	 * 
	 * @param name
	 * @return LayoutInfo
	 */
	public LayoutInfo getLayoutInfo(String name) {
		if ( layouts == null || layouts.size() == 0 ) {
			return null;
		}
		
		for (Iterator it = layouts.iterator(); it.hasNext(); ) {
			LayoutInfo info = (LayoutInfo)it.next();
			if ( info.name.equals(name) ) {
				return info;
			}
		}
		
		return null;
	}
	
	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getLayoutMgr()
	 */
	public ElementLayoutManager getLayoutMgr() {
		return this.layoutManager;
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getElement()
	 */
	public MethodElement getElement() {
		return element;
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getType()
	 */
	public String getType() {
		//For user defined type
		if ((element instanceof Practice) && (PracticePropUtil.getPracticePropUtil().isUdtType((Practice)element))) {
			return "udt";  //$NON-NLS-1$
		}		
		
		return element.getType().getName();
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getName()
	 */
	public String getName() {
		return element.getName();
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getDisplayName()
	 */
	public String getDisplayName() {
		
		// [Bug 196399] P-name is not inherited from its base element in an extending element
		return ConfigurationHelper.getPresentationName(element, getLayoutMgr().getConfiguration());
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getId()
	 */
	public String getId() {
		return element.getGuid();
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getUrl()
	 */
	public String getUrl() {
		return url;
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getBackPath()
	 */
	public String getBackPath() {
		return backPath;
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getFilePath()
	 */
	public String getFilePath() {
		return 	elementPath;
	}

	public String getNoAdjustedElementPath() {
		return 	noAdjustedElementPath == null ? elementPath : noAdjustedElementPath;
	}
	
	/**
	 * Returns the file path relative to another element. This is the
	 * relativeTo.backpath + this.elementpath.
	 *
	 * @see org.eclipse.epf.library.layout.IElementLayout#getFilePath(IElementLayout)
	 */

	public String getFilePath(IElementLayout relativeTo) {
		return relativeTo.getBackPath() + this.getFilePath();
	}

	/**
	 * Returns the file name with the given extension.
	 * 
	 * @see org.eclipse.epf.library.layout.IElementLayout#getFileName(String)
	 */

	public String getFileName(String ext) {
		MethodElement elementForElementPath = getElementForElementPath();
		return ResourceHelper.getFileName(elementForElementPath, ext);
	}


	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getXslUrl()
	 */
	public String getXslUrl() {
		if (element instanceof ContentElement) {
			return LayoutResources.getXslUri(getType().toLowerCase(),
					"contentelement"); //$NON-NLS-1$
		} else {
			return LayoutResources.getXslUri(getType().toLowerCase(), null);
		}
	}

	private void buildPath() {
		// this is <plugin>/<element type>/
		elementPath = ""; //$NON-NLS-1$
		backPath = "./"; //$NON-NLS-1$
		if ( !(element instanceof MethodConfiguration || element instanceof MethodLibrary) )
		{
			MethodElement elementForElementPath = getElementForElementPath();
			String path = ResourceHelper.getElementPath(elementForElementPath);
			if ( path != null ) {
				elementPath = path.replace(File.separatorChar, '/');
				backPath = ResourceHelper.getBackPath(elementForElementPath);
				
				noAdjustedElementPath = elementPath;
				elementPath = getLayoutMgr().getAdjustedElementPath(elementPath);
			}

		}
	}
	
	protected MethodElement getElementForElementPath() {
		return element;
	}

	/**
	 * check if the html content generated from this xsl file needs to be scanned or not
	 * scan the content is for identifying element references in the content and copy over resource files
	 * in some cases we don't need to scan the content, for example, the activity breakdown structure
	 * 
	 * @param xslUrl the xsl that html is generated from, null for the default xsl layout
	 * @return boolean
	 */
	public boolean needContentScan(String xslUrl)
	{
		// by default all contents are scanned
		return true;
	}
	
	/**
	 * get the layout for a child element of this element
	 * ActivityElementLayout should override this method to create layout with node path
	 * @param child
	 * @return IElementLayout
	 */
	protected IElementLayout getChildLayout(MethodElement child)
	{
		return layoutManager.getLayout(child, true);
	}
	
	protected void processChild(Object feature, XmlElement parent, MethodElement e,
			boolean includeReferences) {
		if (e != null) {
			IElementLayout l = getChildLayout(e);
			if (l != null) {
				// don't include the references of the refereced elements,
				// otherwise, may cause deadlock
				boolean isContent = (e instanceof MethodElement)
						&& ConfigurationHelper
								.isDescriptionElement((MethodElement) e);
				if (isContent) {
					if (targetElement != null) {
						l.setContentTarget(targetElement);
					}
					l.setElementOwner(element);
				}
				XmlElement childXmlElement = l.getXmlElement(includeReferences);
				parent.addChild(childXmlElement);
				processGrandChild(feature, e, l, childXmlElement);
			}
		}
	}

	protected void processChild(Object feature, XmlElement parent, List items,
			boolean includeReferences) {
		if (items != null && items.size() > 0) {
			for (Iterator it = items.iterator(); it.hasNext();) {
				Object e = it.next();
				if (e instanceof MethodElement) {
					MethodElement me = (MethodElement) e;
					e = ConfigurationHelper.getCalculatedElement(me,
							layoutManager.getConfiguration());
					if (e != null) {
						IElementLayout l = getChildLayout(me);
						if (l != null) {							
							// don't include the references of the refereced
							// elements, otherwise, may cause deadlock
							XmlElement childXmlElement = l.getXmlElement(ConfigurationHelper
									.isDescriptionElement(me) ? true
									: includeReferences);
							modifyChildDisplayName(feature, childXmlElement, me);
							parent.addChild(childXmlElement);
							processGrandChild(feature, me, l, childXmlElement);
						}
					}
				} else {
					processNonMethodElementInProcessChild(e, feature, parent, includeReferences);
				}
			}
		}
	}
	
	protected void modifyChildDisplayName(Object feature,
			XmlElement childXmlElement, MethodElement childElement) {
	}
	
	protected void processNonMethodElementInProcessChild(
			Object nonMethodElementChild, Object feature, XmlElement parent,
			boolean includeReferences) {
	}
	
	protected void processGrandChild(Object feature,
			MethodElement childElememt, IElementLayout childLayout,
			XmlElement childXmlElement) {
	}

	/**
	 * calculate the to-many references
	 * @param elementXml XmlElement
	 * @param includeReferences boolean
	 */
	public void calculate0nReferences(XmlElement elementXml,
			boolean includeReferences) {
		// referenceMap.clear();
		List features = LibraryUtil.getStructuralFeatures(element);
//		List properties = element.getInstanceProperties();
		if (features != null) {
			// get all string type attributes
			for (int i = 0; i < features.size(); i++) {
				EStructuralFeature feature = (EStructuralFeature) features
						.get(i);
				if (feature.isMany()) {
					loadFeature(feature, elementXml, includeReferences);
				}
			}
		}
	}

	protected XmlElement getXmlElement() {
		XmlElement elementXml = new XmlElement("Element") //$NON-NLS-1$
				.setAttribute("Id", getId()) //$NON-NLS-1$	
				.setAttribute("Type", getType()) //$NON-NLS-1$
				.setAttribute("TypeName", TngUtil.getTypeText(element)) //$NON-NLS-1$
				.setAttribute("Name", getName()) //$NON-NLS-1$
				.setAttribute("BackPath", getBackPath()) //$NON-NLS-1$
				.setAttribute("ShapeiconUrl", getShapeiconUrl()) //$NON-NLS-1$
				.setAttribute("DisplayName", getDisplayName()); //$NON-NLS-1$

		if ( showElementLink ) {
			elementXml.setAttribute("Url", getUrl()); //$NON-NLS-1$
		} 
		
		if (getExtender() != null) {
			getExtender().addAttributes(elementXml);
		}
		
		return elementXml;
	}

	/**
	 * load the attributes
	 * @param elementXml XmlElement
	 */
	public void loadAttributes(XmlElement elementXml) {

		boolean isActivityAttribute = (element instanceof Activity) 
			|| (element instanceof ContentDescription) 
				&& (element.eContainer() instanceof Activity || ownerElement instanceof Activity);
		
		List features = LibraryUtil.getStructuralFeatures(element);
//		List properties = element.getInstanceProperties();
		if (features != null) {
			// get all string type attributes
			for (int i = 0; i < features.size(); i++) {
				EStructuralFeature p = (EStructuralFeature) features.get(i);			
				if (!(p instanceof EAttribute) ) {
					continue;
				}
				EAttribute attrib = (EAttribute)p;
				String name = p.getName();
				
				Object value;
				if (name.equals("presentationName")) //$NON-NLS-1$
				{
					// value = TngUtil.getPresentationName(element);
					value = ConfigurationHelper.getPresentationName(element,
							layoutManager.getConfiguration());
				} else if( isActivityAttribute && String.class.isAssignableFrom(attrib.getEAttributeType().getInstanceClass())) {
					
					// for activity, the way to merge attribute from base is different
					value = ConfigurationHelper.getActivityStringAttribute(element, ownerElement, attrib, getLayoutMgr().getConfiguration());
				} else {
					value = getAttributeFeatureValue(p);
				}
				
				// escape Brief Description into HTML entities
				if (name.equals("briefDescription") && value instanceof String) { //$NON-NLS-1$
					MultiFileXMISaveImpl.MyEscape myEscape = new MultiFileXMISaveImpl.MyEscape();
					value = myEscape.convert((String)value);
					value = StrUtil.convertNewlinesToHTML((String)value);
				}

				elementXml
						.newChild("attribute").setAttribute("name", name).setValue((value == null) ? "" : value.toString()); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
			}
			// Get the singleton of the ElementPropertyProviderManager and have it add any additional attributes as needed
			ElementPropertyProviderManager.getInstance().loadAdditionalElementProperties(element, elementXml);
		}
	}

	/**
	 * get the attribute feature value and merge the text, fix url referneces, etc.
	 * @param feature EStructuralFeature
	 * @return Object
	 */
	public Object getAttributeFeatureValue(EStructuralFeature feature) {
		Object value = ConfigurationHelper.calcAttributeFeatureValue(element,
				ownerElement, feature, layoutManager.getConfiguration());

		// now if the target is set and is different from the element or the
		// element's owner
		// then fix the content
		if ((targetElement != null) && (value != null)
				&& (value.toString().length() > 0)) {
			String contentPath = ResourceHelper
					.getElementPath((element instanceof ContentDescription) ? 
							((ownerElement==null) ? (MethodElement) element.eContainer() : ownerElement) 
							: element);

			String backPath = ResourceHelper
					.getBackPath((targetElement instanceof ContentDescription) ? (MethodElement) targetElement
							.eContainer()
							: targetElement);

			value = ResourceHelper.fixContentUrlPath(value.toString(),
					contentPath, backPath);
			
		}
		
		return value;
	}

	/**
	 * load the copyright text
	 * @param elementXml XmlElement
	 */
	public void loadCopyright(XmlElement elementXml) {

		// List items = new ArrayList();
		// ConfigurationHelper.calculateCopyright(element,
		// layoutManager.getConfiguration(), items);
		// if ( items.size() > 0 )
		// {
		// SupportingMaterial copyright;
		// StringBuffer copyrights = new StringBuffer();
		// for ( Iterator it = items.iterator(); it.hasNext(); )
		// {
		// copyright = (SupportingMaterial) it.next();
		// String statement = copyright.getPresentation().getMainDescription();
		//							
		// // need to fix the content for relative links.
		// // since the link is a relative path to the SupportingMaterial
		// location,
		// // need to convert to relative to the current element
		// // so re-calcuate the back path
		// // jxi, 06/28/05
		// String contentPath = ResourceHelper.getElementPath(copyright);
		// String backPath = ResourceHelper.getBackPath(element);
		// statement = ResourceHelper.fixContentUrlPath(statement, contentPath,
		// backPath);
		// copyrights.append(statement);
		// }
		//			
		// elementXml.newChild("copyright").setValue(copyrights.toString());
		// //$NON-NLS-1$
		// }

		String copyright = ConfigurationHelper.getCopyrightText(element,
				layoutManager.getConfiguration());
		if (copyright != null && copyright.length() > 0) {
			elementXml.newChild("copyright").setValue(copyright); //$NON-NLS-1$
		}
	}

	/**
	 * calculate the to-one reference
	 * @param elementXml XmlElement
	 * @param includeReferences boolean
	 */
	public void calculate01References(XmlElement elementXml,
			boolean includeReferences) {
		List features = LibraryUtil.getStructuralFeatures(element);
//		List properties = element.getInstanceProperties();
		if (features != null) {
			// get element references
			for (int i = 0; i < features.size(); i++) {
				EStructuralFeature p = (EStructuralFeature) features.get(i);

				// Object value = element.get(i);

				EClassifier type = p.getEType();
				if (!(type instanceof EClass) || p.isMany()) {
					continue;
				}

				loadFeature(p, elementXml, includeReferences);
			}
		}
	}

	/**
	 * load the non-attribute feature
	 * 
	 * @param feature
	 * @param elementXml
	 * @param includeReferences
	 */
	public void loadFeature(EStructuralFeature feature, XmlElement elementXml,
			boolean includeReferences) {
		if (isExcludeFeature(feature)) {
			return;
		}
		getFeatureValue(feature,  elementXml, includeReferences);
	}
	
	/**
	 * load the non-attribute feature
	 * 
	 * @param feature
	 * @param elementXml
	 * @param includeReferences
	 */
	public Object getFeatureValue(EStructuralFeature feature, XmlElement elementXml,
			boolean includeReferences) {
		
		if (!(feature.getEType() instanceof EClass)) {
			return null;
		}

		String name = feature.getName();
		
		if (!feature.isMany()) {
			MethodElement e = ConfigurationHelper.calc01FeatureValue(element, ownerElement,
					feature, layoutManager.getElementRealizer());
			// Browsing stops working when a role is set to
			// replaced another role
			// for replacer, the base will be evaluated to the replacer
			// and causing deadlock
			if (e != null && e != element) {
				boolean showDetail = (ConfigurationHelper
						.isDescriptionElement(e)
				/*
				 * || (p ==
				 * UmaPackage.eINSTANCE.getMethodUnit_CopyrightStatement())
				 */) ? true : includeReferences;
				
				if ( acceptFeatureValue(feature, e) ) {
					if ( elementXml != null ) {
						processChild(feature, elementXml
										.newChild(TAG_REFERENCE).setAttribute("name", name), e, showDetail); //$NON-NLS-1$ 
					}
					
					return e;
				} else {
					return null;
				}
			}
		} else if (feature.isMany()) {
			List pv = calc0nFeatureValue(element, ownerElement, feature,
					layoutManager.getElementRealizer());
			if ( acceptFeatureValue(feature, pv) ) {
				if ( elementXml != null ) {
					XmlElement childXml = addReferences(feature, elementXml, name, pv);
					if (childXml != null) {
						String sortValue = CategorySortHelper.getCategorySortValue(element);
						if (sortValue != null && sortValue.length() > 0) {
							childXml.setAttribute("sortValue", sortValue);  //$NON-NLS-1$
						}
					}
				}
				return pv;
			} else {
				return null;
			}
		}
		
		return null;
	}

	protected List calc0nFeatureValue(MethodElement element, MethodElement ownerElement, 
			EStructuralFeature feature, ElementRealizer realizer) {
		return ConfigurationHelper.calc0nFeatureValue(element, ownerElement, feature,
				layoutManager.getElementRealizer());
	}	
	
	/**
	 * load the non-attribute feature
	 * 
	 * @param feature
	 * @param elementXml
	 * @param includeReferences
	 */
	public void loadFeature(OppositeFeature feature, XmlElement elementXml,
			boolean includeReferences) {
		String name = feature.getName();

		if (!feature.isMany()) {
			MethodElement e = ConfigurationHelper.calc01FeatureValue(element,
					feature, layoutManager.getElementRealizer());
			// Browsing stops working when a role is set to
			// replaced another role
			// for replacer, the base will be evaluated to the replacer
			// and causing deadlock
			if (e != null && e != element) {
				boolean showDetail = (ConfigurationHelper
						.isDescriptionElement(e)
				/*
				 * || (p ==
				 * UmaPackage.eINSTANCE.getMethodUnit_CopyrightStatement())
				 */) ? true : includeReferences;

				if ( acceptFeatureValue(feature, e) )
				{
					processChild(feature, 
							elementXml
									.newChild(TAG_REFERENCE).setAttribute("name", name), e, showDetail); //$NON-NLS-1$ 
				}
			}
		} else if (feature.isMany()) {
			if (feature == AssociationHelper.ContentElement_Practices || feature == AssociationHelper.Activity_Pratices) {
				loadPractices(elementXml);
			}
			List pv = calc0nFeatureValue(element, feature,
					layoutManager.getElementRealizer());
			if ( acceptFeatureValue(feature, pv) && pv.size() > 0) {
				addReferences(feature, elementXml, name, pv);
			}
		}
	}
	
	private void loadPractices(XmlElement elementXml) {
		if ( ! (element instanceof ContentElement || element instanceof Activity)) {
			return;
		}
		List resultList = new ArrayList();
		Object container = element.eContainer();
		if (container instanceof Practice) {
			container = ConfigurationHelper.getCalculatedElement((Practice) container, layoutManager.getElementRealizer());
			if (container != null) {
				resultList.add(container);
			}
		}		
		OppositeFeature feature = element instanceof Activity ? AssociationHelper.Activity_Pratices :  AssociationHelper.ContentElement_Practices;		
		List list = calc0nFeatureValue(element, feature, layoutManager.getElementRealizer());;
		if (list != null && ! list.isEmpty()) {
			resultList.addAll(list);
		}

		for (int i = resultList.size() - 1; i >=0 ; i--) {
			MethodElement element = (MethodElement) resultList.get(i);
			if (! getPublishCategoryProperty(element)) {
				resultList.remove(i);
			}			
		}
		
		if (resultList.size() > 1) {
			Comparator comparator = PresentationContext.INSTANCE.getPresNameComparator();		
			Collections.<MethodElement>sort(resultList, comparator);
		}
		
		addReferences(feature, elementXml, "Practices", resultList);			//$NON-NLS-1$ 
	}
	
	protected List calc0nFeatureValue(MethodElement element,
			OppositeFeature feature, ElementRealizer realizer) {
		return ConfigurationHelper.calc0nFeatureValue(element, feature,
				layoutManager.getElementRealizer());
	}
	
	/**
	 * load references for the element
	 * @param elementXml XmlElement
	 * @param includeReferences boolean
	 */
	public void loadReferences(XmlElement elementXml, boolean includeReferences) {
		List features = LibraryUtil.getStructuralFeatures(element);
//		List properties = element.getInstanceProperties();
		if (features != null) {
			for (int i = 0; i < features.size(); i++) {
				EStructuralFeature feature = (EStructuralFeature) features
						.get(i);
				if (feature.getEType() instanceof EClass) {
					loadFeature(feature, elementXml, includeReferences);
				}
			}
		}
		
		Collection oppositeProperties = new ArrayList(element.getOppositeFeatures());
		for (Iterator z= oppositeProperties.iterator(); z.hasNext(); )
		{
			OppositeFeature ofeature = (OppositeFeature) z.next();
			loadFeature(ofeature, elementXml, includeReferences);
		}
		//elementXml.setAttribute("ShowFullMethodContent", (layoutManager.getValidator().showExtraInfoForDescriptors()) ? "true" : "false");
	}
	
	protected boolean isExcludeFeature(EStructuralFeature feature) {
		return false;
	}

	/**
	 * add the reference layout to the result
	 * @param feature Object
	 * @param elementXml XmlElement
	 * @param referenceName String
	 * @param element MethodElement
	 */
	public void addReference(Object feature, XmlElement elementXml, String referenceName,
			MethodElement element) {
		processChild(feature, 
				elementXml
						.newChild(TAG_REFERENCE).setAttribute("name", referenceName), element, false); //$NON-NLS-1$ 
	}

	/**
	 * add references to the layout
	 * @param feature
	 * @param elementXml
	 * @param referenceName
	 * @param items
	 */
	public XmlElement addReferences(Object feature, XmlElement elementXml, String referenceName,
			List items) {
		if (items == null || items.isEmpty()) {
			return null;
		}
		boolean excludeThisElement = false;
		if (feature == AssociationHelper.VariabilityElement_ImmediateVarieties) {
			excludeThisElement = true;
		}
		
		HashSet<Object> itemSet = new HashSet<Object>();
		List uniqueItems = new ArrayList();
		for (Object item: items) {
			if (! itemSet.contains(item)) {
				if (excludeThisElement && item == element) {
					continue;
				}
				itemSet.add(item);
				uniqueItems.add(item);
			}
		}
		XmlElement childXml = elementXml.newChild(TAG_REFERENCELIST);
		if (feature instanceof ExtendedOpposite) {
			ExtendedOpposite opposite = (ExtendedOpposite) feature;
			childXml.setAttribute(Att_ReferenceType, "customOpposite");	//$NON-NLS-1$
			if (opposite.getLayout() != null && opposite.getLayout().length() > 0) {
				childXml.setAttribute(IMetaDef.layout, opposite.getLayout());
			}
		}
//		processChild(feature, childXml.setAttribute("name", referenceName), uniqueItems, false); //$NON-NLS-1$
		if (feature instanceof QualifiedReference) {
			ExtendedReference qRef = (QualifiedReference) feature;
			childXml.setAttribute("qualifierId", qRef.getId());		//$NON-NLS-1$
			childXml.setAttribute("qualifierName", qRef.getName());	//$NON-NLS-1$	

		} else if (feature instanceof ExtendedReference) {
			ExtendedReference eRef = (ExtendedReference) feature;					
			childXml.setAttribute("referenceId", eRef.getId());		//$NON-NLS-1$
			childXml.setAttribute("referenceName", eRef.getName());	//$NON-NLS-1$
			if (eRef.getContributeTo() != null) {
				childXml.setAttribute("contributeTo", eRef.getContributeTo());	//$NON-NLS-1$
			}			
			
			if (referenceName == Att_ExtendeReference_1) {
				childXml.setAttribute("format", "immidate child list");	//$NON-NLS-1$ 	//$NON-NLS-2$

			} else if (referenceName == Att_ExtendeReference_2) {	
				for (QualifiedReference qRef : eRef.getQualifiedReferences()) {
					List<MethodElement> list = ConfigurationHelper.calc0nFeatureValue(
							element, qRef.getReference(), layoutManager
									.getElementRealizer());
					if (list != null && !list.isEmpty()) {
						uniqueItems.removeAll(list);
					}
				}				
				processChild(feature, childXml.setAttribute("name", referenceName), uniqueItems, false); //$NON-NLS-1$
				for (QualifiedReference qRef : eRef.getQualifiedReferences()) {
					List<MethodElement> list = ConfigurationHelper.calc0nFeatureValue(
							element, qRef.getReference(), layoutManager
									.getElementRealizer());
					if (list != null && !list.isEmpty()) {
						addReferences(qRef, childXml, "Qualified references", list);		//$NON-NLS-1$
					}
				}
				childXml.setAttribute("format", "nested list");	//$NON-NLS-1$	//$NON-NLS-2$
				return childXml;
			}
		}
		processChild(feature, childXml.setAttribute("name", referenceName), uniqueItems, false); //$NON-NLS-1$		
		return childXml;
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getXmlElement(boolean)
	 */
	public XmlElement getXmlElement(boolean includeReferences) {
		XmlElement elementXml = getXmlElement();

		// load the references
		if (includeReferences) {

			// load the copyright info
			loadCopyright(elementXml);

			// load the attributes
			loadAttributes(elementXml);
			loadExtendedAttributes(elementXml);

			loadReferences(elementXml, false);
			
			loadUdtReferences(elementXml);			
		
			loadQrReferences(elementXml);
			
			loadExtendedReferences(elementXml);
			
			loadExtendedOpposites(elementXml);
		}

		return elementXml;
	}
	
	protected void loadExtendedOpposites(XmlElement elementXml) {
		List<ExtendedOpposite> opposites = LibraryService.getInstance().getCurrentLibraryManager().getLoadedOpposites();
		if (opposites == null || opposites.isEmpty()) {
			return;
		}
		for (ExtendedOpposite opposite : opposites) {
			if (! opposite.publish()) {
				continue;
			}
//			List list = PropUtil.getPropUtil().getReferencingList(element, opposite.getTargetReference());
//			if (list != null && !list.isEmpty()) {
//				list = ConfigurationHelper.getCalculatedElements(list,  layoutManager.getElementRealizer());
//			}
			
			List list = calc0nFeatureValue(element, opposite.getOFeature(), layoutManager.getElementRealizer());
			if (list != null && !list.isEmpty()) {
				addReferences(opposite, elementXml, opposite.getName(), list);
			}			
		}
	}
	
	public void loadUdtReferences(XmlElement elementXml) {
		List<Practice> udtList = ConfigurationHelper.calc0nFeatureValue(
				element, UmaUtil.MethodElement_UdtList, layoutManager
						.getElementRealizer());
		if (udtList != null && !udtList.isEmpty()) {
			addReferences(UmaUtil.MethodElement_UdtList, elementXml,
					"User defined type references", //$NON-NLS-1$
					udtList);
		}
	}
	
	boolean skipExtendedSection(ModifiedTypeMeta meta, ExtendedSection section, MethodElement e) {
		if (! (e instanceof BreakdownElement)) {
			return false;
		}
		if (null != TypeDefUtil.getInstance().getLinkedElement(e)) {
			return false;
		}
		return meta.isLinkedSection(section);
	}
	
	public void loadExtendedAttributes(XmlElement elementXml) {
		if (ownerElement == null) {
			return;
		}
		PropUtil propUtil = PropUtil.getPropUtil();
		ModifiedTypeMeta meta = propUtil.getGlobalMdtMeta(ownerElement);
		if (meta == null) {
			return;
		}
		
		if (!  meta.getAttributeSections().isEmpty()) {
			for (ExtendedSection section : meta.getAttributeSections()) {
				if (skipExtendedSection(meta, section, ownerElement)) {
					continue;
				}
				List<ExtendedAttribute> attributes = section.getAttributes();
				if (attributes == null || attributes.isEmpty()) {
					continue;
				}
				XmlElement sectionXml = elementXml.newChild(TAG_SECTION);
				setXmlAttributes(section, sectionXml);
				boolean toRemoveSection = true;
				for (ExtendedAttribute eAtt : attributes) {
					XmlElement attXml = sectionXml.newChild(TAG_RTE);
					String value = (String) getAttributeFeatureValue(eAtt.getAttribute());
					if (IMetaDef.choice.equalsIgnoreCase(eAtt.getValueType())) {
						for (MetaElement me : eAtt.getChoiceValues()) {
							if (me.getId().equals(value)) {
								value = me.getTextContent();
							}
						}
						
					} else if (IMetaDef.attachment.equalsIgnoreCase(eAtt.getValueType())) {
						value = ResourceHelper.convertToRteString(value);
					}
					if (value != null && value.trim().length() > 0) {
						toRemoveSection = false;	
					}
					setXmlAttributes(eAtt, attXml);
					attXml.setValue(value);//$NON-NLS-1$
				}
				if (toRemoveSection) {
					elementXml.removeChild(sectionXml);
				}
			}
			return;
		}
		
		for (ExtendedSection section : meta.getRteSections()) {
			if (skipExtendedSection(meta, section, ownerElement)) {
				continue;
			}
			List<ExtendedAttribute> attributes = section.getRtes();
			if (attributes == null || attributes.isEmpty()) {
				continue;
			}
			XmlElement sectionXml = elementXml.newChild(TAG_SECTION);
			setXmlAttributes(section, sectionXml);
			boolean toRemoveSection = true;
			for (ExtendedAttribute eAtt : attributes) {
				XmlElement attXml = sectionXml.newChild(TAG_RTE);
				String value = (String) getAttributeFeatureValue(eAtt.getAttribute());
				if (value != null && value.trim().length() > 0) {
					toRemoveSection = false;	
				}
				setXmlAttributes(eAtt, attXml);
				attXml.setValue(value);//$NON-NLS-1$
			}
			if (toRemoveSection) {
				elementXml.removeChild(sectionXml);
			}
		}
	}
	
	private void setXmlAttributes(ExtendedAttribute att, XmlElement xmlElement) {
		xmlElement.setAttribute("name", att.getName());		//$NON-NLS-1$
		xmlElement.setAttribute("id", att.getId());			//$NON-NLS-1$
	}
	
	public void loadExtendedReferences(XmlElement elementXml) {
		PropUtil propUtil = PropUtil.getPropUtil();
		ModifiedTypeMeta meta = propUtil.getGlobalMdtMeta(element);
		if (meta == null) {
			return;
		}
		
		ElementRealizer realizer = layoutManager.getElementRealizer();
		
		for (ExtendedSection section : meta.getReferenceSections()) {
			if (skipExtendedSection(meta, section, element)) {
				continue;
			}
			List<ExtendedReference> references = section.getReferences();
			if (references == null || references.isEmpty()) {
				continue;
			}
			XmlElement sectionXml = elementXml.newChild(TAG_SECTION);
			setXmlAttributes(section, sectionXml);
			
			Map<ExtendedReference, List<MethodElement>> tableRefMap = new HashMap<ExtendedReference, List<MethodElement>>();
			List<ExtendedTable> tables = section.getTables();
			if (tables != null && !tables.isEmpty()) {
				for (ExtendedTable table : tables) {
					tableRefMap.put(table.getColumnReference(), Collections.EMPTY_LIST);
					tableRefMap.put(table.getRowReference(), Collections.EMPTY_LIST);
					tableRefMap.put(table.getCellReference(), Collections.EMPTY_LIST);
				}
			}
			
			boolean toRemoveSection = true;
			for (ExtendedReference eRef : references) {
//				if (! eRef.publish()) {
//					continue;
//				}
				List<MethodElement> list = ConfigurationHelper.calc0nFeatureValue(
						element, eRef.getReference(), realizer);
				if (list != null && !list.isEmpty()) {
					toRemoveSection = false;
					
					if (tableRefMap.containsKey(eRef)) {
						tableRefMap.put(eRef, list);
					}
					if (eRef.publish()) {
						addReferences(eRef, sectionXml, Att_ExtendeReference_1, list);	//$NON-NLS-1$
						addReferences(eRef, sectionXml, Att_ExtendeReference_2, list);	//$NON-NLS-1$
					}
				}
			}
			if (toRemoveSection) {
				elementXml.removeChild(sectionXml);
			}
						
			if (tables == null || tables.isEmpty()) {
				continue;
			}
			
			for (ExtendedTable table : tables) {
				List<MethodElement> colList = tableRefMap.get(table.getColumnReference());
				List<MethodElement> rowList = tableRefMap.get(table.getRowReference());
				List<MethodElement> celList = tableRefMap.get(table.getCellReference());
				if (colList.isEmpty() || rowList.isEmpty()) {
					continue;
				}
				
				XmlElement cXml = sectionXml.newChild(TAG_TABLE);
				cXml.setAttribute("tableId", table.getId());		//$NON-NLS-1$
				cXml.setAttribute("tableName", table.getName());	//$NON-NLS-1$
				cXml.setAttribute("columnSplit", table.getColumnSplit());//$NON-NLS-1$
				
				List<MethodElement> colList0 = propUtil.getExtendedReferenceList(element, table.getColumnReference(), false);
				List<MethodElement> rowList0 = propUtil.getExtendedReferenceList(element, table.getRowReference(), false);
				if (colList0 == null || colList0.isEmpty() || rowList0 == null || rowList0.isEmpty()) {
					return;
				}
				
				ReferenceTable referenceTable = propUtil.getReferenceTable(element, table, false);								
				
				if (referenceTable == null && this instanceof DescriptorLayout) {
					MethodElement linkedElement = ((DescriptorLayout) this).getLinkedElement();
					if (linkedElement != null) {
						referenceTable = propUtil.getReferenceTable(linkedElement, table, false);
						colList0 = propUtil.getExtendedReferenceList(linkedElement, table.getColumnReference(), false);
						rowList0 = propUtil.getExtendedReferenceList(linkedElement, table.getRowReference(), false);					
					}
				}
				
				Map<MethodElement, MethodElement> colMap = new HashMap<MethodElement, MethodElement>();
				Map<MethodElement, MethodElement> rowMap = new HashMap<MethodElement, MethodElement>();
				for (MethodElement e : colList0) {
					MethodElement r = ConfigurationHelper.getCalculatedElement(e, realizer);
					if (r != null) {
						colMap.put(r, e);
					}
				}
				for (MethodElement e : rowList0) {
					MethodElement r = ConfigurationHelper.getCalculatedElement(e, realizer);
					if (r != null) {
						rowMap.put(r, e);
					}				
				}				
				XmlElement ccXml = cXml.newChild(TAG_ColumnList);
				for (MethodElement e : colList) {
					XmlElement cccXml = ccXml.newChild(TAG_Column);
					String name = ConfigurationHelper.getPresentationName(e, layoutManager.getConfiguration());
					cccXml.setAttribute("name", name);				//$NON-NLS-1$
					addReference(table.getColumnReference().getReference(), cccXml, table.getColumnReference().getId(), e);
				}
				
				ccXml = cXml.newChild(TAG_RowList);
				for (MethodElement rowE : rowList) {
					XmlElement cccXml = ccXml.newChild(TAG_Row);
					String name = ConfigurationHelper.getPresentationName(rowE, layoutManager.getConfiguration());
					cccXml.setAttribute("name", name);				//$NON-NLS-1$
					addReference(table.getColumnReference().getReference(), cccXml, table.getColumnReference().getId(), rowE);
					MethodElement rowE0 = rowMap.get(rowE);
					for (MethodElement colE : colList) {
						MethodElement colE0 = colMap.get(colE);
						MethodElement celE = referenceTable == null ? null : referenceTable.getCellElement(rowE0, colE0);
						if (celE != null) {
							celE = ConfigurationHelper.getCalculatedElement(celE, realizer);
						}
						XmlElement ccccXml = cccXml.newChild(TAG_Cell);
						name = celE == null ? "" : ConfigurationHelper.getPresentationName(celE, layoutManager.getConfiguration());		//$NON-NLS-1$
						ccccXml.setAttribute("name", name);				//$NON-NLS-1$
						if (celE != null) {
							addReference(table.getCellReference().getReference(), ccccXml, table.getCellReference().getId(), celE);
						}
					}
				}
			}
		}
	}
	
	private void setXmlAttributes(ExtendedSection section, XmlElement xmlElement) {
		xmlElement.setAttribute("name", section.getName());		//$NON-NLS-1$
		String type = section.getType();
		if (type.equals(IMetaDef.ATTRIBUTE)) {
			type = IMetaDef.RTE;
		}
		xmlElement.setAttribute("type", type);		//$NON-NLS-1$
		xmlElement.setAttribute("id", section.getId());			//$NON-NLS-1$
		if (section.getLayout() != null && section.getLayout().length() > 0) {
			xmlElement.setAttribute(IMetaDef.layout, section.getLayout());
		}
	}
	
	protected void loadQrReferences(XmlElement elementXml) {
	}
	
	/**
	 * some layout need to have the feature values for further processing. So
	 * this method will be called when a feature is calculated in this abstract
	 * class
	 * 
	 * @param name
	 * @param value
	 */
	protected boolean acceptFeatureValue(EStructuralFeature feature, Object value) {
		return true;
	}

	protected boolean acceptFeatureValue(OppositeFeature feature, Object value) {
		if ( feature == AssociationHelper.DescribableElement_CustomCategories) {
			if ( value instanceof CustomCategory ) {
				return getPublishCategoryProperty((MethodElement)value);
			} else if ( value instanceof List) {
				List items = (List)value;
				int i = 0;
				while ( i < items.size() ) {
					MethodElement e = (MethodElement)items.get(i);
					if ( !getPublishCategoryProperty(e) ) {
						items.remove(i);
					} else {
						i++;
					}
				}
				
				return true;
			}
		}
			
		return true;
	}
	
	private boolean getPublishCategoryProperty(MethodElement e) {
		MethodElementProperty prop = TngUtil.getPublishCategoryProperty(e);
		if ( prop == null ) {
			return false;
		}
		
		String v = prop.getValue();
		if ( v == null || !v.toString().equals("true") ) { //$NON-NLS-1$
			return false;
		}
	
		return true;
	}
	
	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getShapeiconUrl()
	 */
	public String getShapeiconUrl() {
		URI uri = null;
		String imageUrl;
		
		// String imageFile;
		VariabilityElement uriInheritingBase = null;
		if (element instanceof DescribableElement) {
			uri = ((DescribableElement) element).getShapeicon();

			if (uri == null && element instanceof VariabilityElement) {
				VariabilityElement[] uriInheritingBases = new VariabilityElement[1];
				uri = ConfigurationHelper.getInheritingUri(
						(DescribableElement) element, uri, uriInheritingBases,
						getLayoutMgr().getConfiguration(), 1);
				uriInheritingBase = uriInheritingBases[0];
			}
		}
		MethodElement element1 = uriInheritingBase == null ? element : uriInheritingBase;

		ILibraryResourceManager resMgr = ResourceHelper.getResourceMgr(element1);

		if (uri == null || resMgr == null ) {
			imageUrl = getDefaultShapeiconUrl();
		} else {
			imageUrl = NetUtil.decodedFileUrl(uri.toString());
		}

		// need to copy the image file if it's not in the default directory
		if (!imageUrl.startsWith("images/")) //$NON-NLS-1$
		{
		
			// From EPF 1.2, shapeIcon/nodeIcon stores uri relative to plugin path. 
			// Below section of code is necessary to append plugin name to shapeIcon/nodeIcon uri.
			MethodPlugin plugin = UmaUtil.getMethodPlugin(element1);
			if(plugin != null){
				if(!imageUrl.startsWith(plugin.getName()) ){
//					String pluginPath = ResourceHelper.getPluginPath(element);
//					File file = new File(pluginPath + File.separator+ imageUrl);
//					imageUrl = NetUtil.encodeFileURL(FileUtil.getRelativePath(file, 
//							new File(libRoot)));
					imageUrl = NetUtil.encodeFileURL(plugin.getName() + "/" + imageUrl); //$NON-NLS-1$
				}
			}
			
			if ( resMgr != null ) {
				// need decoded URL for file ops
				String decodedImageUrl = NetUtil.decodedFileUrl(imageUrl);
				File source = new File(resMgr.resolve(element1, decodedImageUrl));
				File dest = new File(getLayoutMgr().getPublishDir(), decodedImageUrl);
				FileUtil.copyFile(source, dest);
			}
		}

		return imageUrl;
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getNodeiconUrl()
	 */
	public String getNodeiconUrl() {
		return ""; //$NON-NLS-1$
	}

	public String getDefaultShapeiconUrl() {
		String type = element.getType().getName().toLowerCase();
		if (element instanceof CustomCategory) {
			CustomCategory cc = (CustomCategory) element;
			if (MethodElementPropUtil.getMethodElementPropUtil().isTransientElement(cc)) {
				if (cc.getName().equals("Roles")) {//$NON-NLS-1$
					type = "roleset";//$NON-NLS-1$
				} else if (cc.getName().equals("Tasks")) {//$NON-NLS-1$
					type = "discipline";//$NON-NLS-1$
				} else if (cc.getName().equals("Work Products")) {//$NON-NLS-1$
					type = "domain";//$NON-NLS-1$
				} else if (cc.getName().equals("Guidance")) {//$NON-NLS-1$
					type = "guidances";//$NON-NLS-1$
				} else if (cc.getName().equals("Processes")) {//$NON-NLS-1$
					type = "processes";//$NON-NLS-1$
				}
			}
		}
		
		//For user defined type
		if ((element instanceof Practice) && (PracticePropUtil.getPracticePropUtil().isUdtType((Practice)element))) {
			try {
				boolean debug = LibraryPlugin.getDefault().isDebugging();
				Logger logger = LibraryPlugin.getDefault().getLogger();
				
				String imagesPath = getLayoutMgr().getPublishDir() + "images"; //$NON-NLS-1$
				UserDefinedTypeMeta udtMeta = PracticePropUtil.getPracticePropUtil().getUtdData((Practice)element);
				String shapeIcon = udtMeta.getRteNameMap().get(UserDefinedTypeMeta._shapeIcon);
				if (debug) {
					logger.logInfo("The udt shape icon get from meta: " + shapeIcon); //$NON-NLS-1$
				}
				if (shapeIcon != null) {
					File shapeIconFile = new File(NetUtil.decodedFileUrl(new URL(shapeIcon).getFile()));
					if (debug) {
						logger.logInfo("The udt shape icon file: " + shapeIconFile); //$NON-NLS-1$
					}
					if (FileUtil.copyFileToDir(shapeIconFile, imagesPath)) {
						if (debug) {
							logger.logInfo("Copy the udt shape icon succeed"); //$NON-NLS-1$
						}
						return "images/" + shapeIconFile.getName(); //$NON-NLS-1$
					}					
				}
				type = "UDT";	//$NON-NLS-1$
			} catch (Exception e) {
				LibraryPlugin.getDefault().getLogger().logError(e);
			}			
		}		
		
		return LayoutResources.getDefaultShapeiconUrl(type);
	}

	/**
	 * @see org.eclipse.epf.library.layout.IElementLayout#getDiagramiconUrl()
	 */
	public String getDiagramiconUrl() {
		return "icons/" + element.getType().getName() + ".gif"; //$NON-NLS-1$ //$NON-NLS-2$
	}

	/**
	 * this is a shared method to load the work order of the work breakdown
	 * element. will be used by all work breakdown elemnt layout.
	 * 
	 * @param elementXml
	 *            XmlElement the parent xml element to load the work order
	 *            layout
	 */
	protected void loadWorkOrder(XmlElement elementXml) {
		EStructuralFeature feature = UmaPackage.eINSTANCE
				.getWorkBreakdownElement_LinkToPredecessor();

		List items = ConfigurationHelper.calc0nFeatureValue(element, feature,
				layoutManager.getElementRealizer());
		XmlElement predecessorXml = elementXml
				.newChild(TAG_REFERENCELIST).setAttribute("name", feature.getName()); //$NON-NLS-1$ 
		if (items != null && items.size() > 0) {
			for (Iterator it = items.iterator(); it.hasNext();) {
				WorkOrder wo = (WorkOrder) it.next();
				MethodElement me = (MethodElement) ConfigurationHelper
						.calc01FeatureValue(wo, UmaPackage.eINSTANCE
								.getWorkOrder_Pred(), layoutManager
								.getElementRealizer());
				if (me != null) {
					IElementLayout l = getChildLayout(me);
					if (l != null) {
						predecessorXml.addChild(l.getXmlElement(false));
					}
				}
			}
		}
	}
	
	/**
	 * show the descriptors of the method element
	 * @param descriptors
	 */
	protected void processDescriptors(XmlElement elementXml) {
		
		// 180583 - Pub options to allow adding (when publishing) all descriptors under a method element in form of their path
		
		if ( !getLayoutMgr().getValidator().showRelatedDescriptors() ) {
			return;
		}
		
		// show the role descriptors referencing this role
		OppositeFeature of = null;
		
		if ( this.element instanceof Role ) {
			of = AssociationHelper.Role_RoleDescriptors;
		} else if ( this.element instanceof Task ) {
			of = AssociationHelper.Task_TaskDescriptors;
		} else if ( this.element instanceof WorkProduct ) {
			of = AssociationHelper.WorkProduct_WorkProductDescriptors;
		}
			
		List descriptors = ConfigurationHelper.calc0nFeatureValue(
				this.element, of,
				layoutManager.getElementRealizer());

		// create a element nodes for cescriptor list
		XmlElement descListXml = elementXml.newChild(TAG_REFERENCELIST).setAttribute("name", "descriptors"); //$NON-NLS-1$ //$NON-NLS-2$
		
		addDescriptors(descriptors, descListXml);
	}

	private void addDescriptors(List descriptors, XmlElement descListXml) {
		for (int i = 0; i < descriptors.size(); i++ ) {
			Descriptor desc = (Descriptor)descriptors.get(i);
			List parents = __getSuperActivities(desc);
			addDescriptor(descListXml, desc, parents, true);			
		}
	}

	private void addDescriptor(XmlElement descListXml, Descriptor desc, List parents, boolean topLevelCall) {
		IElementLayout layout = getChildLayout(desc);
		XmlElement descXml = layout.getXmlElement(false);
		descListXml.addChild(descXml);
		
		//Show entry/exist state values
		if (desc instanceof WorkProductDescriptor && layout instanceof AbstractElementLayout) {
			AbstractElementLayout aLayout = (AbstractElementLayout) layout;
			
			EAttribute att;
			String value;
			att = UmaPackage.eINSTANCE.getWorkProductDescriptor_ActivityEntryState();
			value = (String) aLayout.getAttributeFeatureValue(att);
			
			if (value != null && value.length() > 0) {
				descXml
				.newChild("attribute").setAttribute(att.getName(), value); //$NON-NLS-1$ 
			}
			att = UmaPackage.eINSTANCE.getWorkProductDescriptor_ActivityExitState();
			value = (String) aLayout.getAttributeFeatureValue(att);
			if (value != null && value.length() > 0) {
				descXml
				.newChild("attribute").setAttribute(att.getName(), value); //$NON-NLS-1$ 
			}
		}
		
		boolean toProcessExtendedActs = processDescritorsNewOption
				&& topLevelCall;
		Set<Activity> processedExtendedActSet = null;
		Set<Activity> allLocalActSet = null;
		if (toProcessExtendedActs) {
			processedExtendedActSet = new HashSet<Activity>();
			allLocalActSet = getAllLocalActSet(parents);
		}
		
		// List parents = __getSuperActivities(desc);
		for (int p = 0; p < parents.size(); p++) {
			Activity act = (Activity) parents.get(p);
			layout = getChildLayout(act);
			XmlElement actXml = layout.getXmlElement(false);
			descXml.addChild(actXml);
			if (toProcessExtendedActs) {
				processExtendedAct(desc, descListXml, parents, p, act,
						processedExtendedActSet, allLocalActSet);
			}
		}
	}
	
	private Set getAllLocalActSet(List<Activity> bases) {
		MethodConfiguration config = getLayoutMgr().getConfiguration();
		Set ret = new HashSet<Activity>();
		for (Activity act: bases) {
			ret.addAll(ConfigurationHelper.getLocalContributersAndReplacers(act, config));
		}		
		return ret;
	}
	
	private void processExtendedAct(Descriptor desc, XmlElement descListXml,
			List parents, int p, Activity act,
			Set<Activity> processedExtendedActSet,
			Set<Activity> allLocalActSet) {
		MethodConfiguration config = getLayoutMgr().getConfiguration();

		List actExtenders = ConfigurationHelper.getExtenders(act, config);
		if (!actExtenders.isEmpty()) {
			for (Object obj : actExtenders) {
				Activity extAct = (Activity) obj;
				if (processedExtendedActSet.contains(extAct)) {
					continue;
				}
				processedExtendedActSet.add(extAct);

				List<Activity> extenderParents = __getSuperActivities(extAct);
				extenderParents.add(extAct);
				
				boolean toAdd = true;
				if (p < parents.size() - 1) {
					Activity superAct = extAct;
					for (int pp = p + 1; pp < parents.size(); pp++) {
						Activity parent = (Activity) parents.get(pp);						
						parent = checkLocalAct(allLocalActSet, superAct, parent);
						if (parent != null) {
							extenderParents.add(parent);
						} else {
							toAdd = false;
							break;
						}
					}
				}
				
				if (toAdd) {
					addDescriptor(descListXml, desc, extenderParents, false);
				}
			}
		}

	}

	//1. return locally contributing act if superAct has a BE locally contributing to parent
	//2. return null if if superAct has a BE locally replacing parent
	//3. return parent otherwise
	private Activity checkLocalAct(Set<Activity> allLocalActSet, Activity superAct,
			Activity parent) {
		for (BreakdownElement be : superAct
				.getBreakdownElements()) {
			if (be instanceof Activity) {
				Activity actBe = (Activity) be;
				if (allLocalActSet.contains(be) && 
						parent == actBe.getVariabilityBasedOnElement()) {
					if (actBe.getVariabilityType() == VariabilityType.LOCAL_REPLACEMENT) {
						return null;
					}
					if (actBe.getVariabilityType() == VariabilityType.LOCAL_CONTRIBUTION) {
						return actBe;
					}
				}
			}
		}
		
		return parent;
	}
	
	private List __getSuperActivities(BreakdownElement element) {
		List items = new ArrayList();
		
		// build the parent nodes
		BreakdownElement parent = element.getSuperActivities(); 
		while ( parent != null ) {
			
			// need to realize the activity, so that we get the correct link and parent links
			// 204745 - wrong process usage path for contributing activities
			parent = (BreakdownElement)ConfigurationHelper.getCalculatedElement(parent, layoutManager.getElementRealizer());
			if ( parent == null ) {
				break;
			}

			items.add(0, parent);
			if (LibraryUtil.isProcess(parent) ) {
				break;
			}
			parent = parent.getSuperActivities();
		}

		return items;
	}
	
	protected boolean isBreakdownElement_Guidances(EStructuralFeature feature) {
		UmaPackage umaPkg = UmaPackage.eINSTANCE;
		if (feature == umaPkg.getBreakdownElement_Checklists()) {
			return true;
		}
		if (feature == umaPkg.getBreakdownElement_Concepts()) {
			return true;
		}
		if (feature == umaPkg.getBreakdownElement_Examples()) {
			return true;
		}
		if (feature == umaPkg.getBreakdownElement_Guidelines()) {
			return true;
		}	
		if (feature == umaPkg.getBreakdownElement_ReusableAssets()) {
			return true;
		}	
		if (feature == umaPkg.getBreakdownElement_SupportingMaterials()) {
			return true;
		}		
		
		return false;
	}

	protected ElementLayoutExtender getExtender() {
		if (extender == null) {
			extender = ConfigurationHelper.getDelegate().newElementLayoutExtender(this);
		}
		return extender;
	}
	
	protected List<MethodElement> getTagQualifiedList(MethodConfiguration config, List<MethodElement> items) {
		ElementLayoutExtender extender = getExtender();
		if (extender == null) {
			return items;
		}
		
		return extender.getTagQualifiedList(config, items);
	}
	
	protected List addBreakdownElementsToContentElements(List contentElements, List breakdownElements) {
		if ( !getLayoutMgr().getValidator().showRelatedDescriptors() ) {
			return contentElements;
		}
		if (breakdownElements == null || breakdownElements.isEmpty()) {
			return contentElements;
		} else if (contentElements == null || contentElements.isEmpty()) {
			return breakdownElements;
		}		
		Set set = new HashSet(contentElements);
		for (Object obj : breakdownElements) {
			boolean toAdd = true;
			if (obj instanceof Descriptor) {
				MethodElement element = ProcessUtil.getAssociatedElement((Descriptor) obj);
				element = ConfigurationHelper.getCalculatedElement(element, layoutManager.getElementRealizer());
				if (set.contains(element) || set.contains(obj)) {
					toAdd = false;
				}
			}
			
			if (toAdd) {
				contentElements.add(obj);
				set.add(obj);
			}
		}
		
		return contentElements;
	}
	
	
}