diff --git a/feed.xml b/feed.xml
index a43f3d9..5fac348 100644
--- a/feed.xml
+++ b/feed.xml
@@ -3,10 +3,10 @@
   <channel>
     <title></title>
     <description></description>
-    <link>/</link>
-    <atom:link href="/feed.xml" rel="self" type="application/rss+xml"/>
-    <pubDate>Mon, 17 Oct 2016 17:49:10 -0400</pubDate>
-    <lastBuildDate>Mon, 17 Oct 2016 17:49:10 -0400</lastBuildDate>
+    <link>/omr/</link>
+    <atom:link href="/omr/feed.xml" rel="self" type="application/rss+xml"/>
+    <pubDate>Mon, 17 Oct 2016 17:57:00 -0400</pubDate>
+    <lastBuildDate>Mon, 17 Oct 2016 17:57:00 -0400</lastBuildDate>
     <generator>Jekyll v3.3.0</generator>
     
       <item>
@@ -27,8 +27,8 @@
 
 </description>
         <pubDate>Wed, 20 Apr 2016 10:55:22 -0400</pubDate>
-        <link>/jekyll/update/2016/04/20/welcome-to-jekyll.html</link>
-        <guid isPermaLink="true">/jekyll/update/2016/04/20/welcome-to-jekyll.html</guid>
+        <link>/omr/jekyll/update/2016/04/20/welcome-to-jekyll.html</link>
+        <guid isPermaLink="true">/omr/jekyll/update/2016/04/20/welcome-to-jekyll.html</guid>
         
         
         <category>jekyll</category>
diff --git a/guide/best-practices.html b/guide/best-practices.html
index 1d8928c..c8366f3 100644
--- a/guide/best-practices.html
+++ b/guide/best-practices.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html" class="active">Guide</a>
+                  <li><a href="/omr/guide/building.html" class="active">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -151,14 +151,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -170,7 +170,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -182,7 +182,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/guide/building.html b/guide/building.html
index 2f1cbc4..2e71ad2 100644
--- a/guide/building.html
+++ b/guide/building.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html" class="active">Guide</a>
+                  <li><a href="/omr/guide/building.html" class="active">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -202,14 +202,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -221,7 +221,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -233,7 +233,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/guide/coding-stds.html b/guide/coding-stds.html
index dd3d41d..cf50457 100644
--- a/guide/coding-stds.html
+++ b/guide/coding-stds.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html" class="active">Guide</a>
+                  <li><a href="/omr/guide/building.html" class="active">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/guide/configuring.html b/guide/configuring.html
index 3d1b4c5..a898812 100644
--- a/guide/configuring.html
+++ b/guide/configuring.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html" class="active">Guide</a>
+                  <li><a href="/omr/guide/building.html" class="active">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/guide/testing.html b/guide/testing.html
index a04a395..382786c 100644
--- a/guide/testing.html
+++ b/guide/testing.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html" class="active">Guide</a>
+                  <li><a href="/omr/guide/building.html" class="active">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/guide/troubleshooting.html b/guide/troubleshooting.html
index 39794eb..f4f4775 100644
--- a/guide/troubleshooting.html
+++ b/guide/troubleshooting.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html" class="active">Guide</a>
+                  <li><a href="/omr/guide/building.html" class="active">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/index.html b/index.html
index e5259ed..7459188 100644
--- a/index.html
+++ b/index.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu" class="active">Home</a></li>
+          <li><a href="/omr/" id="home-menu" class="active">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -141,7 +141,7 @@
 	<section>
 		<div>
 			<a class="centerAlign">
-				<img id="homeimg" src="/images/omrLogo1.png" />
+				<img id="homeimg" src="/omr/images/omrLogo1.png" />
 			</a>
 		</div>
 	</section>
@@ -185,14 +185,14 @@
 
 
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -204,7 +204,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -216,7 +216,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/jekyll/update/2016/04/20/welcome-to-jekyll.html b/jekyll/update/2016/04/20/welcome-to-jekyll.html
index 75e1599..1b85c5f 100644
--- a/jekyll/update/2016/04/20/welcome-to-jekyll.html
+++ b/jekyll/update/2016/04/20/welcome-to-jekyll.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -52,14 +52,14 @@
 </div>
 
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -71,7 +71,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -83,7 +83,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/architecture.html b/reference/architecture.html
index b05f97a..629b8fc 100644
--- a/reference/architecture.html
+++ b/reference/architecture.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/components.html b/reference/components.html
index b5e5b87..1819579 100644
--- a/reference/components.html
+++ b/reference/components.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -159,14 +159,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -178,7 +178,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -190,7 +190,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/gc.html b/reference/gc.html
index e5596d2..417a1ac 100644
--- a/reference/gc.html
+++ b/reference/gc.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -157,14 +157,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -176,7 +176,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -188,7 +188,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/glue.html b/reference/glue.html
index 6ca6920..c2f70f1 100644
--- a/reference/glue.html
+++ b/reference/glue.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/jit.html b/reference/jit.html
index 89508b2..e62726c 100644
--- a/reference/jit.html
+++ b/reference/jit.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/port.html b/reference/port.html
index a72344c..2a3fe35 100644
--- a/reference/port.html
+++ b/reference/port.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -170,14 +170,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -189,7 +189,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -201,7 +201,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/thread.html b/reference/thread.html
index 4f484e6..29628fe 100644
--- a/reference/thread.html
+++ b/reference/thread.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -173,14 +173,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -192,7 +192,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -204,7 +204,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/tools.html b/reference/tools.html
index 63730f9..b1c3cb6 100644
--- a/reference/tools.html
+++ b/reference/tools.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/util.html b/reference/util.html
index 0952a30..b47d6f2 100644
--- a/reference/util.html
+++ b/reference/util.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/reference/vm.html b/reference/vm.html
index 2d320b4..353340a 100644
--- a/reference/vm.html
+++ b/reference/vm.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html" class="active">Reference</a>
+                  <li><a href="/omr/reference/architecture.html" class="active">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/releases/first-release.html b/releases/first-release.html
index 9a9c141..21b2638 100644
--- a/releases/first-release.html
+++ b/releases/first-release.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html" class="active">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html" class="active">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/resources/blogs.html b/resources/blogs.html
index 1634a36..2c33529 100644
--- a/resources/blogs.html
+++ b/resources/blogs.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html" class="active">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html" class="active">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/resources/omr-on-github.html b/resources/omr-on-github.html
index 728f9a3..38a9a3b 100644
--- a/resources/omr-on-github.html
+++ b/resources/omr-on-github.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html" class="active">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html" class="active">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -151,14 +151,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -170,7 +170,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -182,7 +182,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/resources/presentations.html b/resources/presentations.html
index d1912fc..5e5881f 100644
--- a/resources/presentations.html
+++ b/resources/presentations.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html" class="active">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html" class="active">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -178,14 +178,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -197,7 +197,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -209,7 +209,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/resources/whitepapers.html b/resources/whitepapers.html
index ed4f5bd..4e63ddd 100644
--- a/resources/whitepapers.html
+++ b/resources/whitepapers.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html" class="active">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html" class="active">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -149,14 +149,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -168,7 +168,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -180,7 +180,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/starter/goals.html b/starter/goals.html
index 6e43f01..51d0b94 100644
--- a/starter/goals.html
+++ b/starter/goals.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html" class="active">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html" class="active">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -162,14 +162,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -181,7 +181,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -193,7 +193,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/starter/project.html b/starter/project.html
index c2fba5c..cd1598e 100644
--- a/starter/project.html
+++ b/starter/project.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html" class="active">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html" class="active">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -160,14 +160,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -179,7 +179,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -191,7 +191,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>
diff --git a/starter/whatisomr.html b/starter/whatisomr.html
index 745fe79..ffa0398 100644
--- a/starter/whatisomr.html
+++ b/starter/whatisomr.html
@@ -7,18 +7,18 @@
     <meta charset="utf-8">
     <meta http-equiv="X-UA-Compatible" content="IE=edge">
     <meta name="viewport" content="width=device-width, initial-scale=1">
-    <link rel="stylesheet" href="/css/style.css">
-    <link rel="stylesheet" href="/css/dropit.css">
-    <link rel="stylesheet" href="/css/prism.css">
-    <link rel="stylesheet" href="/css/font-awesome.min.css">
+    <link rel="stylesheet" href="/omr/css/style.css">
+    <link rel="stylesheet" href="/omr/css/dropit.css">
+    <link rel="stylesheet" href="/omr/css/prism.css">
+    <link rel="stylesheet" href="/omr/css/font-awesome.min.css">
     <link rel="stylesheet" href="//fonts.googleapis.com/css?family=Open+Sans:300,400,600,700&amp;amp;subset=latin,latin-ext">
 	<link href='https://fonts.googleapis.com/css?family=Roboto:700,300,500,400,100' rel='stylesheet' type='text/css'>
     <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
     <script data-cfasync="false" src="//ajax.googleapis.com/ajax/libs/jquery/2.1.1/jquery.min.js"></script>
-    <script data-cfasync="false" src="/js/app.js"></script>
-    <script data-cfasync="false" src="/js/retina.js"></script>
-    <script data-cfasync="false" src="/js/dropit.js"></script>
-    <script data-cfasync="false" src="/js/prism.js"></script>
+    <script data-cfasync="false" src="/omr/js/app.js"></script>
+    <script data-cfasync="false" src="/omr/js/retina.js"></script>
+    <script data-cfasync="false" src="/omr/js/dropit.js"></script>
+    <script data-cfasync="false" src="/omr/js/prism.js"></script>
 </head>
 
 
@@ -30,23 +30,23 @@
   <div id="mobile-menu">
       <div id="nav-button" class="fa fa-bars fa-2x button"></div>
   </div>
-  <section id="logo"><a href="/" class="omr">Eclipse OMR</a>
+  <section id="logo"><a href="/omr/" class="omr">Eclipse OMR</a>
   </section>
   <div id="navbar">
       <ul id="navmenu">
-          <li><a href="/" id="home-menu">Home</a></li>
+          <li><a href="/omr/" id="home-menu">Home</a></li>
           <li>
               <ul id="getting-started-menu" class="menu">
-                  <li><a href="/starter/whatisomr.html" class="active">Getting started</a>
+                  <li><a href="/omr/starter/whatisomr.html" class="active">Getting started</a>
                       <ul>
                           <li>
-                            <a href="/starter/whatisomr.html">What is OMR?</a>
+                            <a href="/omr/starter/whatisomr.html">What is OMR?</a>
                           </li>
                           <li>
-                            <a href="/starter/goals.html">Project goals</a>
+                            <a href="/omr/starter/goals.html">Project goals</a>
                           </li>
                           <li>
-                          <a href="/starter/project.html">Get involved</a>
+                          <a href="/omr/starter/project.html">Get involved</a>
                           </li>
                      </ul>
                   </li>
@@ -54,19 +54,19 @@
           </li>
           <li>
               <ul id="guide-menu" class="menu">
-                  <li><a href="/guide/building.html">Guide</a>
+                  <li><a href="/omr/guide/building.html">Guide</a>
                       <ul>
-                          <li><a href="/guide/building.html">Building</a>
+                          <li><a href="/omr/guide/building.html">Building</a>
                           </li>
-                          <li><a href="/guide/configuring.html">Configuring</a>
+                          <li><a href="/omr/guide/configuring.html">Configuring</a>
                           </li>
-                          <li><a href="/guide/testing.html">Testing your runtime</a>
+                          <li><a href="/omr/guide/testing.html">Testing your runtime</a>
                           </li>
-                          <li><a href="/guide/troubleshooting.html">Troubleshooting</a>
+                          <li><a href="/omr/guide/troubleshooting.html">Troubleshooting</a>
                           </li>
-                          <li><a href="/guide/best-practices.html">Best practices</a>
+                          <li><a href="/omr/guide/best-practices.html">Best practices</a>
                           </li>
-                          <li><a href="/guide/coding-stds.html">Coding standards</a>
+                          <li><a href="/omr/guide/coding-stds.html">Coding standards</a>
                           </li>
                       </ul>
                   </li>
@@ -74,27 +74,27 @@
           </li>
           <li>
               <ul id="reference-menu" class="menu">
-                  <li><a href="/reference/architecture.html">Reference</a>
+                  <li><a href="/omr/reference/architecture.html">Reference</a>
                       <ul>
-                          <li><a href="/reference/architecture.html">Architecture</a>
+                          <li><a href="/omr/reference/architecture.html">Architecture</a>
                           </li>
-                          <li><a href="/reference/components.html">Components:</a>
+                          <li><a href="/omr/reference/components.html">Components:</a>
                           </li>
-						  <li><a class="subsub" href="/reference/thread.html">Thread</a>
+						  <li><a class="subsub" href="/omr/reference/thread.html">Thread</a>
                           </li>
-                          <li><a class="subsub" href="/reference/gc.html">GC</a>
+                          <li><a class="subsub" href="/omr/reference/gc.html">GC</a>
                           </li>
-						  <li><a class="subsub" href="/reference/vm.html">VM</a>
+						  <li><a class="subsub" href="/omr/reference/vm.html">VM</a>
                           </li>
-                          <li><a class="subsub" href="/reference/jit.html">JIT</a>
+                          <li><a class="subsub" href="/omr/reference/jit.html">JIT</a>
                           </li>
-						  <li><a class="subsub" href="/reference/port.html">Port</a>
+						  <li><a class="subsub" href="/omr/reference/port.html">Port</a>
                           </li>
-                          <li><a class="subsub" href="/reference/tools.html">Tools</a>
+                          <li><a class="subsub" href="/omr/reference/tools.html">Tools</a>
                           </li>
-						  <li><a class="subsub" href="/reference/glue.html">Glue</a>
+						  <li><a class="subsub" href="/omr/reference/glue.html">Glue</a>
                           </li>
-						  <li><a class="subsub" href="/reference/util.html">Util</a>
+						  <li><a class="subsub" href="/omr/reference/util.html">Util</a>
                           </li>
                       </ul>
                   </li>
@@ -102,13 +102,13 @@
           </li>
           <li>
               <ul id="resources-menu" class="menu">
-                  <li><a href="/resources/omr-on-github.html">Resources</a>
+                  <li><a href="/omr/resources/omr-on-github.html">Resources</a>
                       <ul>
-                          <li><a href="/resources/omr-on-github.html">OMR on GitHub</a>
+                          <li><a href="/omr/resources/omr-on-github.html">OMR on GitHub</a>
                           </li>
-                          <li><a href="/resources/presentations.html">Presentations</a>
+                          <li><a href="/omr/resources/presentations.html">Presentations</a>
                           </li>
-                          <li><a href="/resources/blogs.html">Blogs</a>
+                          <li><a href="/omr/resources/blogs.html">Blogs</a>
                           </li>
                       </ul>
                   </li>
@@ -116,9 +116,9 @@
           </li>
 		  <li>
               <ul id="releases-menu" class="menu">
-                  <li><a href="/releases/first-release.html">Releases</a>
+                  <li><a href="/omr/releases/first-release.html">Releases</a>
                       <ul>
-                          <li><a href="/releases/first-release.html">What's new</a>
+                          <li><a href="/omr/releases/first-release.html">What's new</a>
                           </li>
                       </ul>
                   </li>
@@ -128,7 +128,7 @@
 		<div id="eggContainer">
 		<div align="center">
 			<a href="https://projects.eclipse.org/projects/technology.omr" style="padding-right: 0px;">
-				<img id="incubatingIcon" align="center" src="/images/incubating.png" border="0" alt="Incubation" />
+				<img id="incubatingIcon" align="center" src="/omr/images/incubating.png" border="0" alt="Incubation" />
 			</a>
 		</div>
 		<h6 id="incubateText">Incubation</h6>
@@ -173,14 +173,14 @@
       
     </section>
 
-    <a id="top" href="#"><img src="/images/arrow.png"></a>
+    <a id="top" href="#"><img src="/omr/images/arrow.png"></a>
 
 <footer>
 
 <div id="f_container">
 	
 		<div id="f_1">
-			<div class="f_icon" style="background-image: url(/images/inforound.png);">
+			<div class="f_icon" style="background-image: url(/omr/images/inforound.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link">&nbsp;<i class="fa fa-chevron-circle-right f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://projects.eclipse.org/projects/technology.omr">OMR on Eclipse Technology projects</a>
@@ -192,7 +192,7 @@
 		</div>
 		
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/GitHub-Mark-64px.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/GitHub-Mark-64px.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-github-alt f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://github.com/eclipse/omr">Contribute on GitHub</a>
@@ -204,7 +204,7 @@
 		</div>
 
 		<div id="f_1">
-			<div class="f_icon"  style="background-image: url(/images/fa_thumb_up.png);">
+			<div class="f_icon"  style="background-image: url(/omr/images/fa_thumb_up.png);">
 			</div>
 			<div class="f_link_group bold">
 				<span class="f_link"><i class="fa fa-twitter f_mini" aria-hidden="true"></i>&nbsp;&nbsp;<a href="https://twitter.com/eclipseomr">Follow us on Twitter</a>