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"committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 16:25:05 2021 -0800" }, "message": "moved xml env to correct place" }, { "commit": "829bf79558b2234253359c5e8753614d75a9d66d", "tree": "1b16ea975aee038883d084fa0fbbb0aea968ff56", "parents": [ "3f3a8e7a978332320ac128bb044cc6e47e8de5b5" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 16:22:02 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 16:22:02 2021 -0800" }, "message": "added definition of\n\u003cexecutionEnvironment\u003eJavaSE-11\u003c/executionEnvironment\u003e" }, { "commit": "3f3a8e7a978332320ac128bb044cc6e47e8de5b5", "tree": "97c3f0ab178a4c023efde1a9ed954c07fb4ffd82", "parents": [ "aad7eb4fe904881f4a658e935847f5cc4c8ef786" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 16:01:35 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 16:01:35 2021 -0800" }, "message": "specify the build plugin as well as the repository" }, { "commit": "aad7eb4fe904881f4a658e935847f5cc4c8ef786", "tree": "c9aa78f667431059303b0db5604de6b44007fe21", "parents": [ "e5c3d33b261631a96ee395a37b62ead29539b35d" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 15:42:52 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 15:42:52 2021 -0800" }, "message": "testing osgi repository\n\u003curl\u003ehttps://repo.eclipse.org/content/repositories/tycho-snapshots/org/eclipse/tycho/tycho-p2/\u003c/url\u003e" }, { "commit": "e5c3d33b261631a96ee395a37b62ead29539b35d", "tree": "c3eaf5116e0549674fdd415f463035c82f37ca69", "parents": [ "7a5ebe6a9089189e8fcc66ccc7f0ed71d82c43b4" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 11:51:06 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 11:51:06 2021 -0800" }, "message": "removed tycho-snapshots (no longer exists)" }, { "commit": "7a5ebe6a9089189e8fcc66ccc7f0ed71d82c43b4", "tree": "76c9401b632eaadc713b3b775ce7dc206c3e5cbd", "parents": [ "0fa1e8beccb8780f50feacaf036ca531d2ebf24a" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 11:47:07 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 11:47:07 2021 -0800" }, "message": "added tycho-snapshots" }, { "commit": "0fa1e8beccb8780f50feacaf036ca531d2ebf24a", "tree": "c3eaf5116e0549674fdd415f463035c82f37ca69", "parents": [ "bafa0fb0a351775258384b6254db15df1db8fc0d" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 11:00:22 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 11:00:22 2021 -0800" }, "message": "added another repository to get apache collections4" }, { "commit": "bafa0fb0a351775258384b6254db15df1db8fc0d", "tree": "c5d24bb061293696fe7429c15b0d41b361d65917", "parents": [ "6f5e028091ca4842eab48309c59bba0de60546c7" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 10:50:21 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 10:50:21 2021 -0800" }, "message": "changing repository to http://download.eclipse.org/releases/2019-09/\nto try to find BIRT in tycho" }, { "commit": "6f5e028091ca4842eab48309c59bba0de60546c7", "tree": "4a285e585c5acf758526e98e85655a8dc6a52478", "parents": [ "14c6841b582ae6c7c56b19b98601f13df4b836d3" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 10:31:03 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 10:31:03 2021 -0800" }, "message": "changes to POM.xml" }, { "commit": 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"author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 09:01:21 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 09:01:21 2021 -0800" }, "message": "reordered dependencies" }, { "commit": "fe80fd0d2f49a12afed7bb42ef241c4bb49c8c66", "tree": "a0640452bf23d16308ccdd0c8c534df8028555e7", "parents": [ "982e6af89ce610156fe4c1728f82d805e53f694e" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 08:55:56 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Feb 25 08:55:56 2021 -0800" }, "message": "Refactored (moved) class to simplify dependencies" }, { "commit": "982e6af89ce610156fe4c1728f82d805e53f694e", "tree": "2bc22229752197d15762b4b3e67fb21b3b0d5b0e", "parents": [ "d6f22439e3efb31eac26c030df8c73c71083e543" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 22:09:42 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 22:09:42 2021 -0800" }, "message": "Fixed genmodel reference is case sensitive\nmodel/ExternalDataSource.genmodel" }, { "commit": "d6f22439e3efb31eac26c030df8c73c71083e543", "tree": "1a48e258604fa4cfcf32f9b63fa54efbf5e22bab", "parents": [ "4415ba6dc416b896df171bf50f5b969aef8b4bf9" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:51:12 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:51:12 2021 -0800" }, "message": "organized imports. corrected feature.xml" }, { "commit": "4415ba6dc416b896df171bf50f5b969aef8b4bf9", "tree": "89c1cee23ae4fd6419b85600a928504bdd37a61c", "parents": [ "b0828349d82858752896e60a972952c4000d197d" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:46:13 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:46:13 2021 -0800" }, "message": "added import re Replaced deprecated method\nActivator.getDefault().getWorkbench()\nwith\nPlatformUI.getWorkbench()" }, { "commit": "b0828349d82858752896e60a972952c4000d197d", "tree": "d8932759d462214faad6668567687eaf8f30bfad", "parents": [ "c2abca7a193bfdbc35fbd24cf4794f9944244a2d" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:44:01 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:44:01 2021 -0800" }, "message": "Replaced deprecated method\nActivator.getDefault().getWorkbench()\nwith\nPlatformUI.getWorkbench()" }, { "commit": "c2abca7a193bfdbc35fbd24cf4794f9944244a2d", "tree": "b02aa9439d67d37348ecd208ec7549b85cdd4b7a", "parents": [ "069ff51a32c5ea6b71813c2f22595ae57c24aeb3" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:30:53 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:30:53 2021 -0800" }, "message": "Fixed deprecated constructors for Float, Character, Boolean, etc." }, { "commit": "069ff51a32c5ea6b71813c2f22595ae57c24aeb3", "tree": "58c078752e71d57b31a0ef736414b5b17b015eb4", "parents": [ "16562eef1c2a85b71772986e7a1c4254e94fe7eb" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:20:23 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:20:23 2021 -0800" }, "message": "Fixed deprecated constructors for Double and Integer" }, { "commit": "16562eef1c2a85b71772986e7a1c4254e94fe7eb", "tree": "dc4565ecc2970d21196fd0b692cf7a16d2ef0be7", "parents": [ "e5bd3a76516433b642298dd9b18b6b5522914976" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:08:56 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:08:56 2021 -0800" }, "message": "new icon" }, { "commit": "e5bd3a76516433b642298dd9b18b6b5522914976", "tree": "4c0d6f942eb813047a885be8fb0f75753f766188", "parents": [ "771551b47ec32c9d56a0eb23488b8bf001a2d3e3" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:08:14 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 21:08:14 2021 -0800" }, "message": "Fixed compiler compliance. Removed custom project compliance settings.\nJava-11 everywhere now." }, { "commit": "771551b47ec32c9d56a0eb23488b8bf001a2d3e3", "tree": "379c9fb1ced0f318895d9d3c2e5c7d08eba32f12", "parents": [ "f11fbd5acfc4b2515884b6b66e4ef3c99ee24cef" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 18:25:06 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 18:25:06 2021 -0800" }, "message": "added new icons" }, { "commit": "f11fbd5acfc4b2515884b6b66e4ef3c99ee24cef", "tree": "33a3eb05dc1ce3fafa9aa1e91315022e4b2d1305", "parents": [ "ee3fde7690a0098390a08ec12375d2447f032eef" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:26:27 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:26:27 2021 -0800" }, "message": "explicitely added BIRT min version number" }, { "commit": "ee3fde7690a0098390a08ec12375d2447f032eef", "tree": "b13e6da56b43dc7ab877c925c4a8d84fd3a9ba56", "parents": [ "ed4d20a4290958d3566976505117233407d013fd" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:17:44 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:17:44 2021 -0800" }, "message": "fixed warning from repo.url" }, { "commit": "ed4d20a4290958d3566976505117233407d013fd", "tree": "07c4edd2e0816e7c258d41156b4db5f0620ee1c8", "parents": [ "1db644ea630761aa282edbff1f08cd04df63af1a" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:10:55 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:10:55 2021 -0800" }, "message": "updated tycho.version to 2.2.0 from 1.0.0" }, { "commit": "1db644ea630761aa282edbff1f08cd04df63af1a", "tree": "71d43e0b5dc001c485f2479c9aa8edfb3fe6f5b3", "parents": [ "9ea57dd32669c664cba6f658360344fee2343843" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:08:51 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 17:08:51 2021 -0800" }, "message": "Updated eclipse-repo to latest in pom.xml releng.tycho.product" }, { "commit": "9ea57dd32669c664cba6f658360344fee2343843", "tree": "06fb2fbe250bc236077edff4bd2ae95025670f32", "parents": [ "e60edacd660d2f0cdd12260d7b90f564a05fffb1" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 16:55:05 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 16:55:05 2021 -0800" }, "message": "Updated classpath and minimum compliance level to Java-11 everywhere" }, { "commit": "e60edacd660d2f0cdd12260d7b90f564a05fffb1", "tree": "150ee44ad425ce84a230303d9a3b1ecc87778058", "parents": [ "7f2d8d7b96912ba9397d15dfb980067c7cb8b5aa" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 16:31:11 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 16:31:11 2021 -0800" }, "message": "Updates to Manifest.MF to JAVA 11 everywhere" }, { "commit": "7f2d8d7b96912ba9397d15dfb980067c7cb8b5aa", "tree": "55d7ba8291ff87664a421e9da46034cbbf0743da", "parents": [ "aac9515fa27d7f952b80dd40d67ea016975bd269" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 13:50:08 2021 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Feb 24 13:50:08 2021 -0800" }, "message": "Committing changes by Harsha Krishnareddy from patch in bug:571476\n\nUpdates core eclipse plugins\nupdates to Java 11\n" }, { "commit": "aac9515fa27d7f952b80dd40d67ea016975bd269", "tree": "4f74710a514d69fe6e4015bcd9584a3fc62bf7cd", "parents": [ "ec509be862f1014e409b82decff1a824876dbf11" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:22:52 2020 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:22:52 2020 -0800" }, "message": "from move-flush branch\n" }, { "commit": "ec509be862f1014e409b82decff1a824876dbf11", "tree": "89c93c18a9dbb564b589d1cac714870d6c2f2db4", "parents": [ "bcb3def899cd017c2bce9d963563ade6df0983b1" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:19:02 2020 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:19:02 2020 -0800" }, "message": "only flush the logger when done() (performance enhancement)" }, { "commit": "bcb3def899cd017c2bce9d963563ade6df0983b1", "tree": "ab86bc5b604b40c02d853a96ae56124bd128707f", "parents": [ "c038f83bd16b2122b358586ba4e309018eb356c0" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:17:56 2020 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:17:56 2020 -0800" }, "message": "Implements new required method \"done()\"" }, { "commit": "c038f83bd16b2122b358586ba4e309018eb356c0", "tree": "8a4277954920d9b826d05d3db7078c18a13215be", "parents": [ "7cb33cb1178403975ef0407ffac585bb0206e520" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:17:13 2020 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Nov 24 20:17:13 2020 -0800" }, "message": "Only flush the autoexperiment logger when the convergence is done (to\nimprove performance)" }, { "commit": "7cb33cb1178403975ef0407ffac585bb0206e520", "tree": "a1bd66e3fb01b30176e29518c3492dfa17ae9506", "parents": [ "8c51bcb63b93f148d9fb4b9ee671a34f202c174c" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Sep 15 11:25:58 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Sep 15 11:25:58 2020 -0700" }, "message": "fixed edge case bug when denominator is zero. Still need unnormalize\nerror to walk downhill." }, { "commit": "8c51bcb63b93f148d9fb4b9ee671a34f202c174c", "tree": "7d6277ddc5a9ab793828c77966feac10b37158d9", "parents": [ "5cfae6df78942b048f68aff122278675fcafcca5" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Sep 10 09:37:30 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Sep 10 09:37:30 2020 -0700" }, "message": "updating version" }, { "commit": "5cfae6df78942b048f68aff122278675fcafcca5", "tree": "ecac5740a7bd0a7e9c42f386f01d31341a69af06", "parents": [ "01f888fc33c934b0ffb8c38a5cfbf9822cf4d4d7" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Sep 10 09:37:03 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Sep 10 09:37:03 2020 -0700" }, "message": "updateing version number" }, { "commit": "01f888fc33c934b0ffb8c38a5cfbf9822cf4d4d7", "tree": "8dccc5cb003d0a318407ed546f08b294944cf0a1", "parents": [ "4c26fd28f761b3fb6a2ea46bf32ac3e059821c55" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Aug 24 11:10:09 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Aug 24 11:10:09 2020 -0700" }, "message": "Switch to higher precision in the computation. BigDecimal" }, { "commit": "4c26fd28f761b3fb6a2ea46bf32ac3e059821c55", "tree": "e6e83e983b0d357198de972867470ebd8ae18df8", "parents": [ "6845261ed1df9560ebb99a9f36385833bb998125" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Aug 20 09:49:27 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Thu Aug 20 09:49:27 2020 -0700" }, "message": "Fix Bug in Compound Error function when reference data (eg Deaths) are\nall zero" }, { "commit": "6845261ed1df9560ebb99a9f36385833bb998125", "tree": "16504b5004cab2d5201be47a14b104e73ab52ddf", "parents": [ "08ba86f29dcb2df71740b9920f0406be52bc7c95" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Aug 19 17:22:02 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Aug 19 17:22:02 2020 -0700" }, "message": "fixed error messages" }, { "commit": "08ba86f29dcb2df71740b9920f0406be52bc7c95", "tree": "8f3dfe3f7c98fd2e8fd8f75912f9324dcc2d0849", "parents": [ "1090e973b5bc3716dff5b5b9e1c930c7028bb3ca" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Aug 18 16:27:53 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Tue Aug 18 16:27:53 2020 -0700" }, "message": "updated release and integration to 4.0.2" }, { "commit": "1090e973b5bc3716dff5b5b9e1c930c7028bb3ca", "tree": "337ad1520d1a7f83420de67332aa313fa65ddc1b", "parents": [ "7ec59c4c25c5b2dd0aea2a94e69a40482290b37e" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 11:08:15 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 11:08:15 2020 -0700" }, "message": "Fix to build. Inadvertently\n\u003cpackaging\u003eeclipse-repository\u003c/packaging\u003e\nwas changed to\n\u003cpackaging\u003eeclipse-update-site\u003c/packaging\u003e\n\nreverting change.\n" }, { "commit": "7ec59c4c25c5b2dd0aea2a94e69a40482290b37e", "tree": "739812e3178118a773da396487203963f1a6ae3b", "parents": [ "b31496de5dbae227a86e8b3315f530fd54a8f4a3" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 07:54:23 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 07:54:23 2020 -0700" }, "message": "Bug 565455 - The STEM AI plugin called \"Automatic Experiments\" requires\na more flexible and configurable error function\n\nThis contribution from Vishrawas Gopalakrishnan implements the feature\nrequest" }, { "commit": "b31496de5dbae227a86e8b3315f530fd54a8f4a3", "tree": "829155642f1285f8cb3ce3b9aa078f089f2a8000", "parents": [ "8f93f5775a479ffad6c7fe2a5764028be0bbaf29" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 07:52:15 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 07:52:15 2020 -0700" }, "message": "Bug 565455 - The STEM AI plugin called \"Automatic Experiments\" requires\na more flexible and configurable error function\n\nThis patch from Vishrawas Gopalakrishnan implements the feature request" }, { "commit": "8f93f5775a479ffad6c7fe2a5764028be0bbaf29", "tree": "a7867e9ef512bd11b998128b37e69dce8c7ece80", "parents": [ "edbac0de9bba6ced496ad48f8fba45ec12e817c4" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 07:49:18 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jul 27 07:49:18 2020 -0700" }, "message": "Bug 565455 - The STEM AI plugin called \"Automatic Experiments\" requires\na more flexible and configurable error function\n\nThis patch from Vishrawas Gopalakrishnan implements the requested\nfeature. Automatic Experiments use a Nelder-Meade downhill simplex\nalgorithms to automatically optimize any disease model with respect to\nreference data. Previously, the error function used\n(SimpleErrorFunctionImpl.java) and only computed the nrmse with respect\nto reference and predicted daily incidence. Many users need to optimize\ntheir models with respect to cumulative incidence and/or cumulative\ndeaths. This patchp provides a more flexible CompountErrorFunction so a\nuser can configure the error function used in the downhill simplex. It\nhandles daily incidence, cumulative incidence, deaths, or even a\ncombination of all three or any two." }, { "commit": "edbac0de9bba6ced496ad48f8fba45ec12e817c4", "tree": "41daff09c2be9998c4b7150ceb71bab35a297884", "parents": [ "2d4afb815d9dfc9d056def986363c20137e52429" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jun 15 17:25:42 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jun 15 17:25:42 2020 -0700" }, "message": "Added BundleListener to HeadlessLauncher to check that workspace plugins\nare loaded during headless launch. Should eliminate possible race\ncondition." }, { "commit": "2d4afb815d9dfc9d056def986363c20137e52429", "tree": "de759beeb575db9e133112b8230ef8d39122fbc7", "parents": [ "0806488f10487587a94fb516ff1be7665336f2b8" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jun 15 17:24:01 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jun 15 17:24:01 2020 -0700" }, "message": "Changed getContext to Public so headless launcher can set up\nBundleListener" }, { "commit": "0806488f10487587a94fb516ff1be7665336f2b8", "tree": "79c75112f1e8a1720b7e757c3b0c23d3d82f5760", "parents": [ "b662106ec2021def0f728b843a3b7ee3c023df97", "2e5c7fcdd219e4402f10c624a73a4a2ec419fcf1" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Jun 12 16:11:43 2020 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Jun 12 16:11:43 2020 -0700" }, "message": "Merge branch \u0027auto_exp_fix\u0027 of ssh://git.eclipse.org:29418/stem/org.eclipse.stem\n" }, { "commit": "2e5c7fcdd219e4402f10c624a73a4a2ec419fcf1", "tree": "a6087793abcd26d5b61198e8cdd5779626e5ba53", "parents": [ "1a757167fb3cfc6a6852ae4f58c9f13322667719" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Wed Jun 10 16:33:38 2020 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Wed Jun 10 16:33:38 2020 -0700" }, "message": "compile fix\n" }, { "commit": "1a757167fb3cfc6a6852ae4f58c9f13322667719", "tree": "81fd3491be88fb598379a90a13652006f5f1415e", "parents": [ "4cafdc75da73bdae5874913a32c8eafc9b9c4e45" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Wed Jun 10 16:29:29 2020 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Wed Jun 10 16:29:29 2020 -0700" }, "message": "remove first line to match STEM\u0027s new logger\n" }, { "commit": "4cafdc75da73bdae5874913a32c8eafc9b9c4e45", "tree": "9205c28a8976edbbfacec5a628424d1b2b1fc249", "parents": [ "5264792bc81bc88cc5438f0c80571ea40924ef23" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Wed Jun 10 16:28:13 2020 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Wed Jun 10 16:28:13 2020 -0700" }, "message": "copy scenario\n" }, { "commit": "b662106ec2021def0f728b843a3b7ee3c023df97", "tree": "59949502e5e653212ee0383f1d381501ad60a168", "parents": [ "8789036e62e8d1613afad11ae80feb112fe0b13a" ], "author": { "name": "aswaid5bt", "email": "ahmadswaid@gmail.com", "time": "Mon May 04 09:06:10 2020 +0200" }, "committer": { "name": "aswaid5bt", "email": "ahmadswaid@gmail.com", "time": "Mon May 04 09:06:10 2020 +0200" }, "message": "ppc64le" }, { "commit": "8789036e62e8d1613afad11ae80feb112fe0b13a", "tree": "c89e3e29baca0712786147e176965c71199f401a", "parents": [ "5264792bc81bc88cc5438f0c80571ea40924ef23" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Apr 22 08:26:08 2020 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed Apr 22 08:26:08 2020 -0700" }, "message": "updated version to 4.0.1" }, { "commit": "5264792bc81bc88cc5438f0c80571ea40924ef23", "tree": "6bf5228a2b49cdafd823090786b449dbd42b32d2", "parents": [ "82bb4c8e9e633d2d77c81e75d57183ad4b1a41a4" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Apr 10 16:56:09 2020 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Apr 10 16:56:09 2020 -0700" }, "message": "auto exp. headless\n" }, { "commit": "82bb4c8e9e633d2d77c81e75d57183ad4b1a41a4", "tree": "2707a28afbc34bd8d68e6ae655b9fa3b5bd8190b", "parents": [ "2fe8a1a2eb760fec14921bd840ca8279a0072aee", "ccbcaeb96b680a8e48db088f43fe1c1704bbf1c1" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Mar 26 10:00:41 2020 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Mar 26 10:00:41 2020 -0700" }, "message": "Merge branch \u0027master\u0027 of ssh://git.eclipse.org:29418/stem/org.eclipse.stem\n" }, { "commit": "2fe8a1a2eb760fec14921bd840ca8279a0072aee", "tree": "4d772de2bc5787ae920ad9a287d421a2d7ee920f", "parents": [ "9e52c3011aa3d23c5de64f573da71e3e08e8548c" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Mar 26 10:00:05 2020 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Mar 26 10:00:05 2020 -0700" }, "message": "fix headless hanging\n" }, { "commit": "ccbcaeb96b680a8e48db088f43fe1c1704bbf1c1", "tree": "30072a6f620363b9a3f308e789e8ec6cbcd6ca3f", "parents": [ "9e52c3011aa3d23c5de64f573da71e3e08e8548c" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jan 27 11:45:23 2020 -0800" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Mon Jan 27 11:45:23 2020 -0800" }, "message": "reordered features to match the xml (and alphabetic order)" }, { "commit": "9e52c3011aa3d23c5de64f573da71e3e08e8548c", "tree": "e7235a96319866fc4c44a43d54945c5ddce157f6", "parents": [ "406d18bb6c0ef000032dd1b8f8689ad86ae21cec", "d1e2b244bd73b636e5bbd81e74608f872e5a2bc3" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Aug 08 16:16:23 2019 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Aug 08 16:16:23 2019 -0700" }, "message": "Merge branch \u0027master\u0027 of ssh://git.eclipse.org:29418/stem/org.eclipse.stem\n" }, { "commit": "406d18bb6c0ef000032dd1b8f8689ad86ae21cec", "tree": "808b67d96f926d7786f3f7f73be89d3031430061", "parents": [ "33b0ece4ba64ab1c9f519b1c67475c624039afc6" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Aug 08 16:12:46 2019 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Aug 08 16:12:46 2019 -0700" }, "message": "fix modulus test\n" }, { "commit": "d1e2b244bd73b636e5bbd81e74608f872e5a2bc3", "tree": "dc679b597415b6294b4e5be10f54d7057ac9e234", "parents": [ "33b0ece4ba64ab1c9f519b1c67475c624039afc6" ], "author": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed May 15 15:58:27 2019 -0700" }, "committer": { "name": "James Kaufman", "email": "jhkauf@us.ibm.com", "time": "Wed May 15 15:58:27 2019 -0700" }, "message": "fixed threading bug when picking locations from local stem project\n" }, { "commit": "33b0ece4ba64ab1c9f519b1c67475c624039afc6", "tree": "59fab11116543912f8f6cd65bb30d0a91e698072", "parents": [ "56c7cde3ed009d0df86303c806d666b86fe9c0e8" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Mar 14 11:11:48 2019 -0700" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Mar 14 11:11:48 2019 -0700" }, "message": "make macdonald ross stochastic\n" }, { "commit": "56c7cde3ed009d0df86303c806d666b86fe9c0e8", "tree": "fd8bce9058acf13a935c3544a589c9bd3ff4b71e", "parents": [ "0bb93dd1c8ad504454a6f5d1be219313309ce364" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Feb 21 15:45:45 2019 -0800" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Thu Feb 21 15:45:45 2019 -0800" }, "message": "fix timeseries problem\n" }, { "commit": "0bb93dd1c8ad504454a6f5d1be219313309ce364", "tree": "fe61032e4405a14db6e90cd035da344b9aff44fa", "parents": [ "fb2c404108b1161456556355d9acc0a52b18d313", "e6a43bf7c73863162518c62fd2abbfb3be07f2b2" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Mon Feb 18 11:21:27 2019 -0800" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Mon Feb 18 11:21:27 2019 -0800" }, "message": "Merge branch \u0027master\u0027 of ssh://git.eclipse.org:29418/stem/org.eclipse.stem into stochastic_fix\n" }, { "commit": "fb2c404108b1161456556355d9acc0a52b18d313", "tree": "e0fd672cd1febc5e15164d88cce254c3f85cb515", "parents": [ "d2bbc5d2d012bc73e0472ef58f6844cefc2ae307" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Feb 15 16:28:04 2019 -0800" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Feb 15 16:28:04 2019 -0800" }, "message": "fix\n" }, { "commit": "d2bbc5d2d012bc73e0472ef58f6844cefc2ae307", "tree": "91c562ce936bfd3903c504b71c5db477157f4d5b", "parents": [ "534cb48824a8d1e4f676b5825244d3883407d20f" ], "author": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Feb 15 15:43:16 2019 -0800" }, "committer": { "name": "Stefan Edlund", "email": "sedlund@us.ibm.com", "time": "Fri Feb 15 15:43:16 2019 -0800" }, "message": "fix\n" }, { "commit": "e6a43bf7c73863162518c62fd2abbfb3be07f2b2", "tree": 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