Test inline.
diff --git a/documentation/contents/index.html b/documentation/contents/index.html
index 856fd21..6ae5de6 100644
--- a/documentation/contents/index.html
+++ b/documentation/contents/index.html
@@ -1,13 +1,3 @@
-<html>
-<head>
-<META http-equiv="Content-Type" content="text/html; charset=ISO-8859-1">
-<title>Agent Modeling Guide</title>
-<link href="book.css" rel="stylesheet" type="text/css">
-<meta content="DocBook XSL Stylesheets V1.75.1" name="generator">
-<link rel="home" href="index.html" title="Agent Modeling Guide">
-<link rel="next" href="Introduction.html" title="Chapter&nbsp;1.&nbsp;Introduction">
-</head>
-<body bgcolor="white" text="black" link="#0000FF" vlink="#840084" alink="#0000FF">
 <div class="navheader">
 <table summary="Navigation header" width="100%">
 <tr>
@@ -40,13 +30,32 @@
 <dd>
 <dl>
 <dt>
+<span class="section"><a href="Introduction.html#Quick_Start">Quick Start</a></span>
+</dt>
+<dd>
+<dl>
+<dt>
+<span class="section"><a href="Introduction.html#Install">Install</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Introduction.html#Welcome.21">Welcome!</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Introduction.html#Cheat.21">Cheat!</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Introduction.html#Follow_the_Tutorial">Follow the Tutorial</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Introduction.html#Follow_your_Interest">Follow your Interest</a></span>
+</dt>
+</dl>
+</dd>
+<dt>
 <span class="section"><a href="Introduction.html#Agent-Based_Modeling">Agent-Based Modeling</a></span>
 </dt>
 <dt>
-<span class="section"><a href="Introduction.html#Other_Uses">Other Uses</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Introduction.html#Credits">Credits</a></span>
+<span class="section"><a href="Introduction.html#Other_Domains">Other Domains</a></span>
 </dt>
 <dt>
 <span class="section"><a href="Introduction.html#The_Agent_Modeling_Platform_.28AMP.29">The Agent Modeling Platform (AMP)</a></span>
@@ -68,30 +77,8 @@
 </dl>
 </dd>
 <dt>
-<span class="section"><a href="Introduction.html#Getting_Started">Getting Started</a></span>
+<span class="section"><a href="Introduction.html#Credits">Credits</a></span>
 </dt>
-<dd>
-<dl>
-<dt>
-<span class="section"><a href="Introduction.html#Setting_up_Eclipse">Setting up Eclipse</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Introduction.html#Get_the_Example_Projects">Get the Example Projects</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Introduction.html#ABM_Researchers">ABM Researchers</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Introduction.html#ABM_Modelers">ABM Modelers</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Introduction.html#ABM_Java_Developers">ABM Java Developers</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Introduction.html#Eclipse_Plugin_Developers">Eclipse Plugin Developers</a></span>
-</dt>
-</dl>
-</dd>
 </dl>
 </dd>
 <dt>
@@ -283,68 +270,117 @@
 <span class="section"><a href="Programer_Guide.html#Overview_6">Overview</a></span>
 </dt>
 <dt>
-<span class="section"><a href="Programer_Guide.html#Getting_Started_2">Getting Started</a></span>
+<span class="section"><a href="Programer_Guide.html#Documentation">Documentation</a></span>
 </dt>
 <dd>
 <dl>
 <dt>
-<span class="section"><a href="Programer_Guide.html#Documentation_and_other_Resources">Documentation and other Resources</a></span>
+<span class="section"><a href="Programer_Guide.html#Online">Online</a></span>
 </dt>
 <dt>
+<span class="section"><a href="Programer_Guide.html#Update_Site">Update Site</a></span>
+</dt>
+</dl>
+</dd>
+<dt>
 <span class="section"><a href="Programer_Guide.html#Installation">Installation</a></span>
 </dt>
-</dl>
-</dd>
 <dt>
-<span class="section"><a href="Programer_Guide.html#Developing_Models">Developing Models</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Programer_Guide.html#More_Information">More Information</a></span>
-</dt>
-<dd>
-<dl>
-<dt>
-<span class="section"><a href="Programer_Guide.html#Integrating_Java_and_AMF_Models">Integrating Java and AMF Models</a></span>
-</dt>
-<dt>
-<span class="section"><a href="Programer_Guide.html#Converting_Existing_Ascape_models">Converting Existing Ascape models</a></span>
-</dt>
-</dl>
-</dd>
-<dt>
-<span class="section"><a href="Programer_Guide.html#Running_Agent_Models">Running Agent Models</a></span>
+<span class="section"><a href="Programer_Guide.html#Example_Java_Models">Example Java Models</a></span>
 </dt>
 <dd>
 <dl>
 <dt>
 <span class="section"><a href="Programer_Guide.html#Exploring_Example_ABM_Models">Exploring Example ABM Models</a></span>
 </dt>
+</dl>
+</dd>
+<dt>
+<span class="section"><a href="Programer_Guide.html#Developing_Models">Developing Models</a></span>
+</dt>
+<dd>
+<dl>
+<dt>
+<span class="section"><a href="Programer_Guide.html#Cheatsheet">Cheatsheet</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Programer_Guide.html#Steps">Steps</a></span>
+</dt>
+</dl>
+</dd>
+<dt>
+<span class="section"><a href="Programer_Guide.html#Executing_Models">Executing Models</a></span>
+</dt>
+<dd>
+<dl>
 <dt>
 <span class="section"><a href="Programer_Guide.html#Tutorial">Tutorial</a></span>
 </dt>
+</dl>
+</dd>
 <dt>
-<span class="section"><a href="Programer_Guide.html#Classic_Java_ABM_Models">Classic Java ABM Models</a></span>
+<span class="section"><a href="Programer_Guide.html#Extending_and_Customizing_AMP">Extending and Customizing AMP</a></span>
 </dt>
-</dl>
-</dd>
-</dl>
-</dd>
 <dt>
-<span class="chapter"><a href="Resources.html">6. Resources</a></span>
+<span class="section"><a href="Programer_Guide.html#Integrating_Java_and_AMF_Models">Integrating Java and AMF Models</a></span>
 </dt>
 <dd>
 <dl>
 <dt>
-<span class="section"><a href="Resources.html#Obtaining_Example_Models">Obtaining Example Models</a></span>
+<span class="section"><a href="Programer_Guide.html#Method_Action">Method Action</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Programer_Guide.html#Protected_Code_Regions">Protected Code Regions</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Programer_Guide.html#Interface_and_Base_Class_Generation">Interface and Base Class Generation</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Programer_Guide.html#Converting_Existing_Ascape_models">Converting Existing Ascape models</a></span>
+</dt>
+</dl>
+</dd>
+</dl>
+</dd>
+<dt>
+<span class="chapter"><a href="Installation_Guide.html">6. Installation Guide</a></span>
 </dt>
 <dd>
 <dl>
 <dt>
-<span class="section"><a href="Resources.html#Import_from_CVS"></a></span>
+<span class="section"><a href="Installation_Guide.html#Tools">Tools</a></span>
+</dt>
+<dd>
+<dl>
+<dt>
+<span class="section"><a href="Installation_Guide.html#Complete_IDE">Complete IDE</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Installation_Guide.html#Eclipse_and_the_Agent_Modeling_Tools">Eclipse and the Agent Modeling Tools</a></span>
+</dt>
+<dt>
+<span class="section"><a href="Installation_Guide.html#Extensions">Extensions</a></span>
 </dt>
 </dl>
 </dd>
 <dt>
+<span class="section"><a href="Installation_Guide.html#Models">Models</a></span>
+</dt>
+<dd>
+<dl>
+<dt>
+<span class="section"><a href="Installation_Guide.html#Obtaining_Example_Models">Obtaining Example Models</a></span>
+</dt>
+</dl>
+</dd>
+</dl>
+</dd>
+<dt>
+<span class="chapter"><a href="Resources.html">7. Resources</a></span>
+</dt>
+<dd>
+<dl>
+<dt>
 <span class="section"><a href="Resources.html#Websites">Websites</a></span>
 </dt>
 <dt>
@@ -353,7 +389,7 @@
 </dl>
 </dd>
 <dt>
-<span class="chapter"><a href="Support.html">7. Support</a></span>
+<span class="chapter"><a href="Support.html">8. Support</a></span>
 </dt>
 <dd>
 <dl>
@@ -404,5 +440,4 @@
 </tr>
 </table>
 </div>
-</body>
-</html>
+
diff --git a/documentation/contents/index.php b/documentation/contents/index.php
index 9ecf07b..5b9548b 100755
--- a/documentation/contents/index.php
+++ b/documentation/contents/index.php
@@ -6,5 +6,6 @@
 	$html .= "</div>";
 
 	# Generate the web page
+	$App->AddExtraHtmlHeader('<link rel="stylesheet" type="text/css" href="book.css"/>' . "\n\t");
 	$App->generatePage($theme, $Menu, $Nav, $pageAuthor, $pageKeywords, $pageTitle, $html);
 ?>