| <?xml version="1.0" encoding="UTF-8"?> |
| <genmodel:GenModel xmi:version="2.0" xmlns:xmi="http://www.omg.org/XMI" xmlns:ecore="http://www.eclipse.org/emf/2002/Ecore" |
| xmlns:genmodel="http://www.eclipse.org/emf/2002/GenModel" modelDirectory="/org.eclipse.stem.diseasemodels.evolving/src" editDirectory="/org.eclipse.stem.diseasemodels.evolving/src" |
| editorDirectory="/org.eclipse.stem.diseasemodels.evolving/src" modelPluginID="org.eclipse.stem.diseasemodels.evolving" |
| templateDirectory="platform:/plugin/org.eclipse.stem.model.codegen/templates" |
| dynamicTemplates="true" forceOverwrite="true" modelName="Evolving" importerID="org.eclipse.emf.importer.ecore" |
| suppressNotification="true" complianceLevel="6.0" publicConstructors="true" editPluginID="org.eclipse.stem.diseasemodels.evolving" |
| editorPluginID="org.eclipse.stem.diseasemodels.evolving" usedGenPackages="platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//common platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//graph platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//model platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//modifier platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//scenario platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//sequencer platform:/plugin/org.eclipse.stem.diseasemodels/model/diseasemodels.genmodel#//standard platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//logger platform:/plugin/org.eclipse.stem.core/model/core.genmodel#//solver platform:/plugin/org.eclipse.emf.ecore/model/Ecore.genmodel#//ecore platform:/plugin/org.eclipse.stem.populationmodels/model/standard.genmodel#//standard platform:/plugin/org.eclipse.stem.definitions/model/definitions.genmodel#//labels"> |
| <foreignModel>evolving.ecore</foreignModel> |
| <templatePluginVariables>STEM_CODEGEN=org.eclipse.stem.model.codegen</templatePluginVariables> |
| <templatePluginVariables>STEM_METAMODEL=org.eclipse.stem.model</templatePluginVariables> |
| <genPackages prefix="Evolving" basePackage="org.eclipse.stem.diseasemodels" disposableProviderFactory="true" |
| ecorePackage="evolving.ecore#/"> |
| <genDataTypes ecoreDataType="evolving.ecore#//BooleanArray"/> |
| <genClasses ecoreClass="evolving.ecore#//EvolvingDiseaseTransformer"> |
| <genFeatures notify="false" createChild="false" propertySortChoices="true" ecoreFeature="ecore:EReference evolving.ecore#//EvolvingDiseaseTransformer/baseDisease"/> |
| <genFeatures notify="false" createChild="false" propertySortChoices="true" ecoreFeature="ecore:EReference evolving.ecore#//EvolvingDiseaseTransformer/evolvedDiseases"/> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingDiseaseTransformer/evolutionCount"/> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingDiseaseTransformer/evolutionCountHardLimit"/> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingDiseaseTransformer/stopAllEvolution"/> |
| </genClasses> |
| <genClasses image="false" ecoreClass="evolving.ecore#//EvolvingDiseaseModel"> |
| <genFeatures property="None" notify="false" createChild="false" propertySortChoices="true" |
| ecoreFeature="ecore:EReference evolving.ecore#//EvolvingDiseaseModel/parentDisease"/> |
| <genFeatures property="None" notify="false" createChild="false" propertySortChoices="true" |
| ecoreFeature="ecore:EReference evolving.ecore#//EvolvingDiseaseModel/transformer"/> |
| <genFeatures property="None" notify="false" createChild="false" propertySortChoices="true" |
| ecoreFeature="ecore:EReference evolving.ecore#//EvolvingDiseaseModel/evolvedAt"/> |
| <genFeatures property="None" createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingDiseaseModel/genome"/> |
| <genFeatures property="None" createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingDiseaseModel/evolutionCount"/> |
| <genOperations ecoreOperation="evolving.ecore#//EvolvingDiseaseModel/evolve"> |
| <genParameters ecoreParameter="evolving.ecore#//EvolvingDiseaseModel/evolve/label"/> |
| </genOperations> |
| <genOperations ecoreOperation="evolving.ecore#//EvolvingDiseaseModel/calculateEvolvedInitialState"/> |
| <genOperations ecoreOperation="evolving.ecore#//EvolvingDiseaseModel/getGeneticDistance"> |
| <genParameters ecoreParameter="evolving.ecore#//EvolvingDiseaseModel/getGeneticDistance/otherDiseaseStrain"/> |
| </genOperations> |
| </genClasses> |
| <genClasses ecoreClass="evolving.ecore#//EvolvingSIDiseaseModelLabel"/> |
| <genClasses ecoreClass="evolving.ecore#//EvolvingSIDiseaseModelLabelValue"/> |
| <genClasses image="false" ecoreClass="evolving.ecore#//EvolvingSIDiseaseModel"> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingSIDiseaseModel/caseMutationRate"/> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingSIDiseaseModel/genomeLength"/> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingSIDiseaseModel/geneticDistNonlinExponent"/> |
| </genClasses> |
| <genClasses ecoreClass="evolving.ecore#//EvolvingSIRDiseaseModelLabel"/> |
| <genClasses ecoreClass="evolving.ecore#//EvolvingSIRDiseaseModelLabelValue"/> |
| <genClasses image="false" ecoreClass="evolving.ecore#//EvolvingSIRDiseaseModel"> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingSIRDiseaseModel/immunityLossRate"/> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingSIRDiseaseModel/crossImmunityRate"/> |
| </genClasses> |
| <genClasses ecoreClass="evolving.ecore#//EvolvingSEIRDiseaseModelLabel"/> |
| <genClasses ecoreClass="evolving.ecore#//EvolvingSEIRDiseaseModelLabelValue"/> |
| <genClasses image="false" ecoreClass="evolving.ecore#//EvolvingSEIRDiseaseModel"> |
| <genFeatures createChild="false" ecoreFeature="ecore:EAttribute evolving.ecore#//EvolvingSEIRDiseaseModel/incubationRate"/> |
| </genClasses> |
| </genPackages> |
| </genmodel:GenModel> |
