| <?xml version="1.0" encoding="UTF-8"?> |
| <!-- ******************************************************************************* --> |
| <!-- * Copyright (c) 2011 University of Illinois All rights reserved. This program --> |
| <!-- * and the accompanying materials are made available under the terms of the --> |
| <!-- * Eclipse Public License v1.0 which accompanies this distribution, and is --> |
| <!-- * available at http://www.eclipse.org/legal/epl-v10.html --> |
| <!-- * --> |
| <!-- * Contributors: --> |
| <!-- * Albert L. Rossi - design and implementation --> |
| <!-- ****************************************************************************** --> |
| <resource-manager-builder |
| xmlns="http://eclipse.org/ptp/rm" |
| xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" |
| xsi:schemaLocation="http://eclipse.org/ptp/rm http://eclipse.org/ptp/schemas/v1.1/rm.xsd" |
| name="Generic PBS Interactive"> |
| <control-data> |
| <!-- Set the default value of this attribute if PBS is installed in a non-standard location --> |
| <attribute name="bindir" visible="false"/> |
| <!-- This is a necessary attribute for the functioning of LML; link it to the batch-specific variable name --> |
| <attribute name="control.queue.name" visible="false"> |
| <link-value-to>destination</link-value-to> |
| </attribute> |
| <attribute name="queues" visible="false"/> |
| <attribute name="mpiPrefix" visible="false"> |
| <default>${ptp_rm:mpiCommand#value} -np ${ptp_rm:mpiNumberOfProcesses#value}</default> |
| </attribute> |
| <attribute name="Account_Name" type="string"> |
| <description>Account to which to charge this job.</description> |
| <tooltip>Format: string</tooltip> |
| </attribute> |
| <attribute name="mpiCommand" type="choice"> |
| <description>Which mpi command to use.</description> |
| <choice>,mpiexec,mpirun</choice> |
| </attribute> |
| <attribute name="mpiNumberOfProcesses" min="1" type="integer"> |
| <description>The '-np' value</description> |
| </attribute> |
| <attribute name="destination" type="string"> |
| <description>Designation of the queue to which to submit the job.</description> |
| <tooltip>Format: queue[@server].</tooltip> |
| </attribute> |
| <attribute name="Resource_List.mem" type="string"> |
| <description>Maximum amount of memory used by all concurrent processes in the job.</description> |
| <tooltip><![CDATA[Format: integer[suffix]; the suffix is a multiplier |
| in bytes or words (word size of the host): b (bytes), |
| w (words), kb/kw (kilo), mb/mw (mega), gb/bw (giga).]]></tooltip> |
| <default>20gb</default> |
| </attribute> |
| <attribute name="Resource_List.walltime" type="string"> |
| <description>Maximum amount of real time during which the job can be in the running state.</description> |
| <tooltip>Format: [[hours:]minutes:]seconds[.milliseconds].</tooltip> |
| <default>00:30:00</default> |
| <validator> |
| <regex expression="\d\d:\d\d:\d\d"/> |
| <error-message>format must be hh:mm:ss</error-message> |
| </validator> |
| </attribute> |
| <start-up-command name="get-queues"> |
| <arg>${ptp_rm:bindir#value}qstat</arg> |
| <arg>-Q</arg> |
| <arg>-f</arg> |
| <stdout-parser delim="\n"> |
| <target ref="queues"> |
| <match> |
| <expression>Queue: ([\w\d]+)</expression> |
| <add field="value"> |
| <entry valueGroup="1"/> |
| </add> |
| </match> |
| </target> |
| </stdout-parser> |
| </start-up-command> |
| <submit-interactive name="submit-interactive" directory="${ptp_rm:directory#value}" waitForId="true" keepOpen="true" |
| flags="ALLOCATE_PTY"> |
| <arg>${ptp_rm:bindir#value}qsub</arg> |
| <arg>-I</arg> |
| <arg>-q ${ptp_rm:destination#value}</arg> |
| <arg>-l nodes=1,mem=${ptp_rm:Resource_List.mem#value},walltime=${ptp_rm:Resource_List.walltime#value}</arg> |
| <arg isUndefinedIfMatches="-A">-A ${ptp_rm:Account_Name#value}</arg> |
| <arg>-V</arg> |
| <input isUndefinedIfMatches=".+ -np">${ptp_rm:mpiPrefix#value}</input> |
| <input>${ptp_rm:executablePath#value} ${ptp_rm:progArgs#value}</input> |
| <stdout-parser delim="\n"> |
| <target ref="@jobId"> |
| <match> |
| <expression>qsub:.+job[\s]+([\d]+[.].+)[\s]to start[\s]*</expression> |
| <set field="name"> |
| <entry valueGroup="1"/> |
| </set> |
| <set field="value"> |
| <entry value="SUBMITTED"/> |
| </set> |
| </match> |
| <match> |
| <expression>qsub:[\s]+job[\s]+([\d]+[.].+)[\s]ready[\s]*</expression> |
| <set field="name"> |
| <entry valueGroup="1"/> |
| </set> |
| <set field="value"> |
| <entry value="RUNNING"/> |
| </set> |
| </match> |
| <match> |
| <expression>.*Job not submitted[\s]*</expression> |
| <set field="value"> |
| <entry value="FAILED"/> |
| </set> |
| </match> |
| </target> |
| <exit-after>qsub:[\s]+job[\s]+([\d]+[.].+)[\s]ready[\s]*</exit-after> |
| </stdout-parser> |
| <stderr-parser delim="\n"> |
| <target ref="@jobId"> |
| <match> |
| <expression>.+</expression> |
| <set field="name"> |
| <entry value="${ptp_rm:@jobId#name}"/> |
| </set> |
| <set field="value"> |
| <entry value="FAILED"/> |
| </set> |
| </match> |
| </target> |
| </stderr-parser> |
| </submit-interactive> |
| <get-job-status name="get-job-status" ignoreExitStatus="true"> |
| <arg>${ptp_rm:bindir#value}qstat</arg> |
| <arg>${ptp_rm:@jobId#name}</arg> |
| <stdout-parser delim="\n"> |
| <target ref="@jobId"> |
| <match> |
| <expression>[\d]+[.].+[\s]+.+[\s]+.+[\s]+.+[\s]+([A-Z])[\s]+.+</expression> |
| <set field="value"> |
| <entry valueGroup="1"/> |
| </set> |
| </match> |
| <test op="EQ"> |
| <value>#value</value> |
| <value>Q</value> |
| <set field="value"> |
| <entry value="QUEUED_ACTIVE"/> |
| </set> |
| </test> |
| <test op="EQ"> |
| <value>#value</value> |
| <value>R</value> |
| <set field="value"> |
| <entry value="RUNNING"/> |
| </set> |
| </test> |
| <test op="EQ"> |
| <value>#value</value> |
| <value>S</value> |
| <set field="value"> |
| <entry value="SUSPENDED"/> |
| </set> |
| </test> |
| <test op="EQ"> |
| <value>#value</value> |
| <value>C</value> |
| <set field="value"> |
| <entry value="COMPLETED"/> |
| </set> |
| </test> |
| <test op="EQ"> |
| <value>#value</value> |
| <value>E</value> |
| <set field="value"> |
| <entry value="COMPLETED"/> |
| </set> |
| </test> |
| <test op="EQ"> |
| <value>#value</value> |
| <value>H</value> |
| <set field="value"> |
| <entry value="SYSTEM_ON_HOLD"/> |
| </set> |
| </test> |
| </target> |
| </stdout-parser> |
| <stderr-parser delim="\n"> |
| <target ref="@jobId"> |
| <match> |
| <expression>.+</expression> |
| <set field="value"> |
| <entry value="COMPLETED"/> |
| </set> |
| </match> |
| </target> |
| </stderr-parser> |
| </get-job-status> |
| <terminate-job name="cancel"> |
| <arg>${ptp_rm:bindir#value}qdel</arg> |
| <arg>${ptp_rm:@jobId#name}</arg> |
| </terminate-job> |
| <launch-tab> |
| <dynamic> |
| <title>Basic Settings</title> |
| <layout> |
| <grid-layout/> |
| </layout> |
| <!-- QUEUES remote path group --> |
| <composite group="true"> |
| <layout> |
| <grid-layout numColumns="3" makeColumnsEqualWidth="false"/> |
| </layout> |
| <widget type="label" style="SWT.LEFT"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER"/> |
| </layout-data> |
| <tooltip>${ptp_rm:destination#tooltip}</tooltip> |
| <fixed-text>Queue: </fixed-text> |
| </widget> |
| <widget type="combo" style="SWT.BORDER" readOnly="true" attribute="destination"> |
| <layout-data> |
| <grid-data widthHint="150" verticalAlign="SWT.CENTER" horizontalAlign="SWT.FILL" horizontalSpan="2"/> |
| </layout-data> |
| <items-from>queues</items-from> |
| </widget> |
| </composite> |
| <widget type="label"/> |
| <!-- ATTRIBUTES group --> |
| <composite group="true"> |
| <layout> |
| <grid-layout numColumns="4" makeColumnsEqualWidth="false" horizontalSpacing="10" verticalSpacing="15"/> |
| </layout> |
| <!-- HEADER --> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_RED"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>Name</fixed-text> |
| </widget> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_RED"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" horizontalSpan="2" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>Value</fixed-text> |
| </widget> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_RED"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>Description</fixed-text> |
| </widget> |
| <!-- row 1 --> |
| <widget type="label" style="SWT.LEFT"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <tooltip>${ptp_rm:Account_Name#tooltip}</tooltip> |
| <fixed-text>Account: </fixed-text> |
| </widget> |
| <widget type="text" style="SWT.BORDER" attribute="Account_Name"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.FILL" verticalAlign="SWT.CENTER" horizontalSpan="2" grabExcessHorizontal="false" widthHint="150"/> |
| </layout-data> |
| </widget> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>${ptp_rm:Account_Name#description}</fixed-text> |
| </widget> |
| <!-- row 2 --> |
| <widget type="label" style="SWT.LEFT"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <tooltip>${ptp_rm:Resource_List.mem#tooltip}</tooltip> |
| <fixed-text>Total Memory Needed: </fixed-text> |
| </widget> |
| <widget type="text" style="SWT.BORDER" attribute="Resource_List.mem"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.FILL" verticalAlign="SWT.CENTER" horizontalSpan="2" grabExcessHorizontal="false" widthHint="150"/> |
| </layout-data> |
| </widget> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>${ptp_rm:Resource_List.mem#description}</fixed-text> |
| </widget> |
| <!-- row 3 --> |
| <widget type="label" style="SWT.LEFT"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <tooltip>${ptp_rm:Resource_List.walltime#tooltip}</tooltip> |
| <fixed-text>Wallclock Time: </fixed-text> |
| </widget> |
| <widget type="text" style="SWT.BORDER" attribute="Resource_List.walltime"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.FILL" verticalAlign="SWT.CENTER" horizontalSpan="2" grabExcessHorizontal="false" widthHint="150"/> |
| </layout-data> |
| </widget> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>${ptp_rm:Resource_List.walltime#description}</fixed-text> |
| </widget> |
| <!-- row 4 --> |
| <widget type="label" style="SWT.LEFT"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>MPI Command: </fixed-text> |
| </widget> |
| <widget type="combo" style="SWT.BORDER" readOnly="true" attribute="mpiCommand"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.FILL" verticalAlign="SWT.CENTER" horizontalSpan="2" grabExcessHorizontal="false"/> |
| </layout-data> |
| </widget> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>${ptp_rm:mpiCommand#description}</fixed-text> |
| </widget> |
| <!-- row 5 --> |
| <widget type="label" style="SWT.LEFT"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>MPI Number of Cores: </fixed-text> |
| </widget> |
| <widget type="spinner" style="SWT.BORDER" attribute="mpiNumberOfProcesses"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" horizontalSpan="2" grabExcessHorizontal="false" widthHint="100"/> |
| </layout-data> |
| </widget> |
| <widget type="label" style="SWT.LEFT" foreground="SWT.COLOR_DARK_BLUE"> |
| <layout-data> |
| <grid-data horizontalAlign="SWT.BEGINNING" verticalAlign="SWT.CENTER" grabExcessHorizontal="false"/> |
| </layout-data> |
| <fixed-text>${ptp_rm:mpiNumberOfProcesses#description}</fixed-text> |
| </widget> |
| </composite> |
| </dynamic> |
| </launch-tab> |
| </control-data> |
| <monitor-data schedulerType="PBS"> |
| </monitor-data> |
| </resource-manager-builder> |
